RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 OR52H1Q8NGJ2 320 aa17.38■□□□□ 0.37
COL9A2-211ENST00000496215 PYDC1Q8WXC3 89 aa17.38■□□□□ 0.37
COL9A2-211ENST00000496215 SPSB4Q96A44 273 aa17.38■□□□□ 0.37
COL9A2-211ENST00000496215 CIB1Q99828 191 aa17.38■□□□□ 0.37
COL9A2-211ENST00000496215 MRPL15Q9P015 296 aaKnown RBP17.38■□□□□ 0.37
COL9A2-211ENST00000496215 LAMP5Q9UJQ1 280 aa17.38■□□□□ 0.37
COL9A2-211ENST00000496215 PCDHB10Q9UN67 800 aa17.38■□□□□ 0.37
COL9A2-211ENST00000496215 KLHDC2Q9Y2U9 406 aa17.38■□□□□ 0.37
COL9A2-211ENST00000496215 CCDC182A6NF36 153 aa17.37■□□□□ 0.37
COL9A2-211ENST00000496215 M0R129 80 aa17.37■□□□□ 0.37
COL9A2-211ENST00000496215 PLPP2O43688 288 aa17.37■□□□□ 0.37
COL9A2-211ENST00000496215 MRPL3P09001 348 aaKnown RBP17.37■□□□□ 0.37
COL9A2-211ENST00000496215 SRP14P37108 136 aaKnown RBP17.37■□□□□ 0.37
COL9A2-211ENST00000496215 MDH2P40926 338 aaKnown RBP17.37■□□□□ 0.37
COL9A2-211ENST00000496215 GATA4P43694 442 aa17.37■□□□□ 0.37
COL9A2-211ENST00000496215 GFOD2Q3B7J2 385 aa17.37■□□□□ 0.37
COL9A2-211ENST00000496215 C12orf73Q69YU5 71 aa17.37■□□□□ 0.37
COL9A2-211ENST00000496215 C1orf87Q8N0U7 546 aa17.37■□□□□ 0.37
COL9A2-211ENST00000496215 MUC20Q8N307 709 aaPredicted RBP17.37■□□□□ 0.37
COL9A2-211ENST00000496215 REEP6Q96HR9 211 aa17.37■□□□□ 0.37
COL9A2-211ENST00000496215 PGAM5Q96HS1 289 aa17.37■□□□□ 0.37
COL9A2-211ENST00000496215 YIPF3Q9GZM5 350 aa17.37■□□□□ 0.37
COL9A2-211ENST00000496215 OR10A2Q9H208 303 aa17.37■□□□□ 0.37
COL9A2-211ENST00000496215 BRD7Q9NPI1 651 aa17.37■□□□□ 0.37
COL9A2-211ENST00000496215 SAC3D1A6NKF1 404 aa17.36■□□□□ 0.37
COL9A2-211ENST00000496215 EBAG9O00559 213 aa17.36■□□□□ 0.37
COL9A2-211ENST00000496215 GMDSO60547 372 aa17.36■□□□□ 0.37
COL9A2-211ENST00000496215 CYB5R3P00387 301 aaPredicted RBP17.36■□□□□ 0.37
COL9A2-211ENST00000496215 PNPP00491 289 aa17.36■□□□□ 0.37
COL9A2-211ENST00000496215 IRF2P14316 349 aa17.36■□□□□ 0.37
COL9A2-211ENST00000496215 CFL1P23528 166 aaKnown RBP17.36■□□□□ 0.37
COL9A2-211ENST00000496215 EPHA2P29317 976 aa17.36■□□□□ 0.37
COL9A2-211ENST00000496215 PSMA6P60900 246 aaKnown RBP17.36■□□□□ 0.37
COL9A2-211ENST00000496215 MAB21L1Q13394 359 aa17.36■□□□□ 0.37
COL9A2-211ENST00000496215 KPNB1Q14974 876 aaKnown RBP17.36■□□□□ 0.37
COL9A2-211ENST00000496215 ZNF181Q2M3W8 571 aa17.36■□□□□ 0.37
COL9A2-211ENST00000496215 LRRN1Q6UXK5 716 aa17.36■□□□□ 0.37
COL9A2-211ENST00000496215 PRSS45Q7RTY3 260 aa17.36■□□□□ 0.37
COL9A2-211ENST00000496215 CNN2Q99439 309 aaKnown RBP17.36■□□□□ 0.37
COL9A2-211ENST00000496215 TEAD3Q99594 435 aa17.36■□□□□ 0.37
COL9A2-211ENST00000496215 A0A0G2JMP0 313 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 A0A0X1KG70 313 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 PRAMEF6Q5VXH4 476 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 ZFP1Q6P2D0 407 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 KRT77Q7Z794 578 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 LRRC28Q86X40 367 aaPredicted RBP17.35■□□□□ 0.37
COL9A2-211ENST00000496215 TCEANCQ8N8B7 351 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 OR4M2Q8NGB6 313 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 OR11L1Q8NGX0 322 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 TMEM163Q8TC26 289 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 DVL3Q92997 716 aaPredicted RBP17.35■□□□□ 0.37
COL9A2-211ENST00000496215 ERGIC1Q969X5 290 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 GABARAPL3Q9BY60 117 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 RIBC2Q9H4K1 309 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 RGCCQ9H4X1 137 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 NIPAL2Q9H841 368 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 G6PC2Q9NQR9 355 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 LRP12Q9Y561 859 aa17.35■□□□□ 0.37
COL9A2-211ENST00000496215 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.34■□□□□ 0.37
COL9A2-211ENST00000496215 hCG_38984A0A1B0GV85 526 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 SLC22A31A6NKX4 558 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 ANKRD30BLA7E2S9 258 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 ALOX5APP20292 161 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 DDOSTP39656 456 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 LCN2P80188 198 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 FAM3AP98173 230 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 DCAF12L2Q5VW00 463 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 NXNL2Q5VZ03 156 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 FAHD2BQ6P2I3 314 aaPredicted RBP17.34■□□□□ 0.37
COL9A2-211ENST00000496215 KCTD18Q6PI47 426 aaPredicted RBP17.34■□□□□ 0.37
COL9A2-211ENST00000496215 KLBQ86Z14 1044 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 GID4Q8IVV7 300 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 Q8TCH9 128 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 FAHD2AQ96GK7 314 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 RBM4BQ9BQ04 359 aaKnown RBP17.34■□□□□ 0.37
COL9A2-211ENST00000496215 OSBPL10Q9BXB5 764 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 FN3KRPQ9HA64 309 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 PATZ1Q9HBE1 687 aaKnown RBP17.34■□□□□ 0.37
COL9A2-211ENST00000496215 TMEM14AQ9Y6G1 99 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 STAB1Q9NY15 2570 aa17.34■□□□□ 0.37
COL9A2-211ENST00000496215 FAM20BO75063 409 aa17.33■□□□□ 0.36
COL9A2-211ENST00000496215 FOXH1O75593 365 aa17.33■□□□□ 0.36
COL9A2-211ENST00000496215 THBS2P35442 1172 aa17.33■□□□□ 0.36
COL9A2-211ENST00000496215 MZT1Q08AG7 82 aa17.33■□□□□ 0.36
COL9A2-211ENST00000496215 MEPCEQ7L2J0 689 aaKnown RBP17.33■□□□□ 0.36
COL9A2-211ENST00000496215 BCDIN3DQ7Z5W3 292 aaKnown RBP17.33■□□□□ 0.36
COL9A2-211ENST00000496215 SPERTQ8NA61 448 aa17.33■□□□□ 0.36
COL9A2-211ENST00000496215 SGK3Q96BR1 496 aa17.33■□□□□ 0.36
COL9A2-211ENST00000496215 IL4I1Q96RQ9 567 aa17.33■□□□□ 0.36
COL9A2-211ENST00000496215 UFSP2Q9NUQ7 469 aa17.33■□□□□ 0.36
COL9A2-211ENST00000496215 H2AFY2Q9P0M6 372 aaPredicted RBP17.33■□□□□ 0.36
COL9A2-211ENST00000496215 CEACAM18A8MTB9 384 aa17.32■□□□□ 0.36
COL9A2-211ENST00000496215 F5H0A9 414 aaPredicted RBP17.32■□□□□ 0.36
COL9A2-211ENST00000496215 H3BNX3 289 aa17.32■□□□□ 0.36
COL9A2-211ENST00000496215 J3QLI3 93 aa17.32■□□□□ 0.36
COL9A2-211ENST00000496215 PHF1O43189 567 aaPredicted RBP17.32■□□□□ 0.36
COL9A2-211ENST00000496215 ZNF205O95201 554 aa17.32■□□□□ 0.36
COL9A2-211ENST00000496215 GATA3P23771 443 aa17.32■□□□□ 0.36
COL9A2-211ENST00000496215 GSK3AP49840 483 aa17.32■□□□□ 0.36
COL9A2-211ENST00000496215 HCCSP53701 268 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms