RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 SEMA6AQ9H2E6 1030 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 PPA2Q9H2U2 334 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 SIRT7Q9NRC8 400 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 MRPL15Q9P015 296 aaKnown RBP11.73□□□□□ -0.53
VARS-228ENST00000495010 KAAG1Q9UBP8 84 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 DNAJB11Q9UBS4 358 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 AP3M1Q9Y2T2 418 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 IGLV1-36A0A0B4J1U3 117 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 A0A1W2PRD5 423 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 A0A1W2PRF3 423 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 A0A1W2PRM7 423 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 CXCR6O00574 342 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 EDF1O60869 148 aaKnown RBP11.72□□□□□ -0.53
VARS-228ENST00000495010 PTBP3O95758 552 aaKnown RBP11.72□□□□□ -0.53
VARS-228ENST00000495010 H1F0P07305 194 aaKnown RBP11.72□□□□□ -0.53
VARS-228ENST00000495010 KLF10Q13118 480 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 MICBQ29980 383 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 SMARCD3Q6STE5 483 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 METAP1DQ6UB28 335 aaPredicted RBP11.72□□□□□ -0.53
VARS-228ENST00000495010 CBLL1Q75N03 491 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 SLC36A1Q7Z2H8 476 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 OR6V1Q8N148 313 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 LNX2Q8N448 690 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 GCSAMQ8N6F7 178 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 SLC26A10Q8NG04 563 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 OR8S1Q8NH09 359 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 MRAPQ8TCY5 172 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 PPP1R14AQ96A00 147 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 NMNAT3Q96T66 252 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 CCL13Q99616 98 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 RPRD1BQ9NQG5 326 aaKnown RBP11.72□□□□□ -0.53
VARS-228ENST00000495010 FBLN5Q9UBX5 448 aa11.72□□□□□ -0.53
VARS-228ENST00000495010 BHLHE40O14503 412 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 NPFFO15130 113 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 NDUFB3O43676 98 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 SERPINA1P01009 418 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 MUC1P15941 1255 aaPredicted RBP11.71□□□□□ -0.53
VARS-228ENST00000495010 ZNF823P16415 610 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 NOS3P29474 1203 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 ZNF92Q03936 586 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 RFX4Q33E94 735 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 KPRPQ5T749 579 aaPredicted RBP11.71□□□□□ -0.53
VARS-228ENST00000495010 SAMD5Q5TGI4 173 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 TEX36Q5VZQ5 186 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 Q6ZPA2 131 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 ARPINQ7Z6K5 226 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 OR4K13Q8NH42 304 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 OR2AE1Q8NHA4 323 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 CYB5R1Q9UHQ9 305 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 N6AMT1Q9Y5N5 214 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 ENPP4Q9Y6X5 453 aa11.71□□□□□ -0.53
VARS-228ENST00000495010 A0A1W2PRQ8 180 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 MEIOCA2RUB1 952 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 ANKRD30BLA7E2S9 258 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 RNASEK-C17orf49H0YIS7 233 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 GPR37O15354 613 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 LHBP01229 141 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 SLC6A6P31641 620 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 OMPP47874 163 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 PRB3Q04118 309 aaPredicted RBP11.7□□□□□ -0.54
VARS-228ENST00000495010 LIPEQ05469 1076 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 DGCR6Q14129 220 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 KRT72Q14CN4 511 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 SNAI3Q3KNW1 292 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 LRRC10Q5BKY1 277 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 C11orf88Q6PI97 169 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 C11orf44Q8N8P7 122 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 LY6G5BQ8NDX9 201 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 OR4C15Q8NGM1 316 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 FANK1Q8TC84 345 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 LRRC29Q8WV35 223 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 H1FXQ92522 213 aaKnown RBP11.7□□□□□ -0.54
VARS-228ENST00000495010 FAM162AQ96A26 154 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 DMRTB1Q96MA1 342 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 IFT27Q9BW83 186 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 PNRC2Q9NPJ4 139 aaKnown RBP11.7□□□□□ -0.54
VARS-228ENST00000495010 CMTM6Q9NX76 183 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 KCNG2Q9UJ96 466 aa11.7□□□□□ -0.54
VARS-228ENST00000495010 FCN3O75636 299 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 HIST1H1CP16403 213 aaKnown RBP11.69□□□□□ -0.54
VARS-228ENST00000495010 NAA10P41227 235 aaPredicted RBP11.69□□□□□ -0.54
VARS-228ENST00000495010 LOXL3P58215 753 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 FXYD6P3P58550 94 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 IKZF1Q13422 519 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 TAF13Q15543 124 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 PCK2Q16822 640 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 WDR38Q5JTN6 314 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 GLYATL3Q5SZD4 288 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 DRAM2Q6UX65 266 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 C1orf122Q6ZSJ8 110 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 DPY19L4Q7Z388 723 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 FGFRL1Q8N441 504 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 OR56B2PQ8NGI1 322 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 OR4C13Q8NGP0 309 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 OR52J3Q8NH60 311 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 SGCDQ92629 289 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 FAM234AQ9H0X4 552 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 OPA3Q9H6K4 179 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 RNPEPL1Q9HAU8 725 aa11.69□□□□□ -0.54
VARS-228ENST00000495010 TRBV4-1A0A0J9YWV2 114 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms