RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 PSKH1P11801 424 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 PDLIM3Q53GG5 364 aaPredicted RBP18.3■□□□□ 0.52
HDDC3-203ENST00000494993 LYPD4Q6UWN0 246 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 KIR3DL3Q8N743 410 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 SPERTQ8NA61 448 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 OR52L1Q8NGH7 329 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 OR2T4Q8NH00 348 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 ZNRF4Q8WWF5 429 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 NSMCE2Q96MF7 247 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 WDFY2Q96P53 400 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 IL1RAPQ9NPH3 570 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 C1orf123Q9NWV4 160 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 C1RLQ9NZP8 487 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 BHLHE40O14503 412 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 ARPC2O15144 300 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 NDUFA7O95182 113 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 RELBQ01201 579 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 METTL11BQ5VVY1 283 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 RPL13AP3Q6NVV1 102 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 C17orf107Q6ZR85 190 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 DCXRQ7Z4W1 244 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 GCSAMQ8N6F7 178 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 PNLDC1Q8NA58 520 aaKnown RBP18.29■□□□□ 0.52
HDDC3-203ENST00000494993 OR4C15Q8NGM1 316 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 GATAD2BQ8WXI9 593 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 COPS4Q9BT78 406 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 POMT1Q9Y6A1 747 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 COMMD3-BMI1R4GMX3 469 aa18.29■□□□□ 0.52
HDDC3-203ENST00000494993 A6NLC8 198 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 GYPAP02724 150 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 GRPP07492 148 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 MSX2P35548 267 aaPredicted RBP18.28■□□□□ 0.52
HDDC3-203ENST00000494993 PRKXP51817 358 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 SRSF4Q08170 494 aaKnown RBP18.28■□□□□ 0.52
HDDC3-203ENST00000494993 OLFML2AQ68BL7 652 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 ZNF826PQ6ZT77 177 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 ZDHHC21Q8IVQ6 265 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 OR56B2PQ8NGI1 322 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 OR51L1Q8NGJ5 315 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 SIRPDQ9H106 197 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 RASSF4Q9H2L5 321 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 OPA3Q9H6K4 179 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 MED4Q9NPJ6 270 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 CD300AQ9UGN4 299 aa18.28■□□□□ 0.52
HDDC3-203ENST00000494993 VWFP04275 2813 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.27■□□□□ 0.52
HDDC3-203ENST00000494993 FCN3O75636 299 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 SLC2A1P11166 492 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 MZT1Q08AG7 82 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 PDCD1Q15116 288 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 OCLNQ16625 522 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 SAMD4BQ5PRF9 694 aaKnown RBP18.27■□□□□ 0.52
HDDC3-203ENST00000494993 FAM90A1Q86YD7 464 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 PGAM4Q8N0Y7 254 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 SLC37A3Q8NCC5 494 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 OR9Q2Q8NGE9 314 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 SSMEM1Q8WWF3 244 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 SLAMF6Q96DU3 332 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 KCNJ15Q99712 375 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 BTBD10Q9BSF8 475 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 TRIM15Q9C019 465 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 ACOXLQ9NUZ1 547 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 IL20Q9NYY1 176 aa18.27■□□□□ 0.52
HDDC3-203ENST00000494993 IGHV1-69DA0A0B4J2H0 117 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 hCG_1807616A0A1W2PRN6 198 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 CLPSL1A2RUU4 121 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 XRCC2O43543 280 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 IGHV1-69P01742 117 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 SPARCP09486 303 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 ENTPD1P49961 510 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 HMGA2P52926 109 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 RPL15P61313 204 aaKnown RBP18.26■□□□□ 0.51
HDDC3-203ENST00000494993 PCK2Q16822 640 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 BTN2A1Q7KYR7 527 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 LNX2Q8N448 690 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 OR8D4Q8NGM9 314 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 OR9Q1Q8NGQ5 310 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 LHX4Q969G2 390 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 CITED1Q99966 193 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 CENPMQ9NSP4 180 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 C14orf119Q9NWQ9 140 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 PDP1Q9P0J1 537 aaPredicted RBP18.26■□□□□ 0.51
HDDC3-203ENST00000494993 KAAG1Q9UBP8 84 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 N6AMT1Q9Y5N5 214 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 LYVE1Q9Y5Y7 322 aa18.26■□□□□ 0.51
HDDC3-203ENST00000494993 ZNF878C9JN71 531 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 DVL1O14640 695 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 KRT36O76013 467 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 LHBP01229 141 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 FMO3P31513 532 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 ARF6P62330 175 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 TAF13Q15543 124 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 C11orf91Q3C1V1 193 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 MIDNQ504T8 468 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 TEX36Q5VZQ5 186 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 BRICD5Q6PL45 260 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 LINC00471Q8N535 108 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 TBC1D15Q8TC07 691 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 SPSB4Q96A44 273 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 CDRT15Q96T59 188 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms