RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 DGCR6LQ9BY27 220 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 NMNAT2Q9BZQ4 307 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 OR51V1Q9H2C8 321 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 RASSF4Q9H2L5 321 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 MUC13Q9H3R2 512 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 BRD7Q9NPI1 651 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 DDX28Q9NUL7 540 aaKnown RBP8.02□□□□□ -1.13
MSH5-218ENST00000494646 COMMD3-BMI1R4GMX3 469 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 A0A1B0GWJ7 208 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 DHRS12A0PJE2 317 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 A8MXK9 166 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 ACOT8O14734 319 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 GMDSO60547 372 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 IFNGP01579 166 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 ANXA2P07355 339 aaKnown RBP8.01□□□□□ -1.13
MSH5-218ENST00000494646 IGHV4-38-2P0DP08 117 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 RAP2AP10114 183 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 PRKACGP22612 351 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 OTX1P32242 354 aaPredicted RBP8.01□□□□□ -1.13
MSH5-218ENST00000494646 GATA4P43694 442 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 SLC25A1P53007 311 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 PAX2Q02962 417 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 GINS1Q14691 196 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 ZNF181Q2M3W8 571 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 C4orf48Q5BLP8 95 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 LINC01590Q5TEZ4 76 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 BTNL3Q6UXE8 466 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 RBMS3Q6XE24 437 aaKnown RBP8.01□□□□□ -1.13
MSH5-218ENST00000494646 ADGRG5Q8IZF4 528 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 C3orf56Q8N813 242 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 OR8B3Q8NGG8 313 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 OR6N2Q8NGY6 317 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 TEX47Q8TBZ9 253 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 CANT1Q8WVQ1 401 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 RAB40AQ8WXH6 277 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 SGK3Q96BR1 496 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 ASB9Q96DX5 294 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 PLEKHA8Q96JA3 519 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 ZNF48Q96MX3 618 aaPredicted RBP8.01□□□□□ -1.13
MSH5-218ENST00000494646 OR8B2Q96RD0 313 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 NUDT16L1Q9BRJ7 211 aaKnown RBP8.01□□□□□ -1.13
MSH5-218ENST00000494646 ADAT1Q9BUB4 502 aaKnown RBP8.01□□□□□ -1.13
MSH5-218ENST00000494646 MS4A7Q9GZW8 240 aaPredicted RBP8.01□□□□□ -1.13
MSH5-218ENST00000494646 PPP1R3EQ9H7J1 279 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 NTN4Q9HB63 628 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 C1orf123Q9NWV4 160 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 DNAJC27Q9NZQ0 273 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 PDP1Q9P0J1 537 aaPredicted RBP8.01□□□□□ -1.13
MSH5-218ENST00000494646 RNF7Q9UBF6 113 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 CLN8Q9UBY8 286 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 PRPF19Q9UMS4 504 aaKnown RBP8.01□□□□□ -1.13
MSH5-218ENST00000494646 BAIAP2Q9UQB8 552 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 LRCH1Q9Y2L9 728 aa8.01□□□□□ -1.13
MSH5-218ENST00000494646 PKD1L1Q8TDX9 2849 aa8□□□□□ -1.13
MSH5-218ENST00000494646 IGHV2-70DA0A0C4DH43 119 aa8□□□□□ -1.13
MSH5-218ENST00000494646 KIR2DS1A0A191URI9 304 aa8□□□□□ -1.13
MSH5-218ENST00000494646 RIIAD1A6NNX1 92 aa8□□□□□ -1.13
MSH5-218ENST00000494646 ZNF878C9JN71 531 aa8□□□□□ -1.13
MSH5-218ENST00000494646 ZNF3P17036 446 aa8□□□□□ -1.13
MSH5-218ENST00000494646 HSD11B1P28845 292 aa8□□□□□ -1.13
MSH5-218ENST00000494646 GSTT1P30711 240 aa8□□□□□ -1.13
MSH5-218ENST00000494646 PITPNBP48739 271 aa8□□□□□ -1.13
MSH5-218ENST00000494646 CX3CR1P49238 355 aa8□□□□□ -1.13
MSH5-218ENST00000494646 UBA52P62987 128 aaKnown RBP8□□□□□ -1.13
MSH5-218ENST00000494646 FAM3AP98173 230 aa8□□□□□ -1.13
MSH5-218ENST00000494646 BAMBIQ13145 260 aa8□□□□□ -1.13
MSH5-218ENST00000494646 OR8B8Q15620 311 aa8□□□□□ -1.13
MSH5-218ENST00000494646 PCK2Q16822 640 aa8□□□□□ -1.13
MSH5-218ENST00000494646 TIGD6Q17RP2 521 aa8□□□□□ -1.13
MSH5-218ENST00000494646 GFOD2Q3B7J2 385 aa8□□□□□ -1.13
MSH5-218ENST00000494646 TEX30Q5JUR7 227 aa8□□□□□ -1.13
MSH5-218ENST00000494646 WDR25Q64LD2 544 aaPredicted RBP8□□□□□ -1.13
MSH5-218ENST00000494646 LRRN1Q6UXK5 716 aa8□□□□□ -1.13
MSH5-218ENST00000494646 CD300LDQ6UXZ3 194 aa8□□□□□ -1.13
MSH5-218ENST00000494646 ZNF841Q6ZN19 808 aa8□□□□□ -1.13
MSH5-218ENST00000494646 FAM57BQ71RH2 274 aa8□□□□□ -1.13
MSH5-218ENST00000494646 SPATA24Q86W54 205 aa8□□□□□ -1.13
MSH5-218ENST00000494646 HS3ST5Q8IZT8 346 aa8□□□□□ -1.13
MSH5-218ENST00000494646 PARP8Q8N3A8 854 aa8□□□□□ -1.13
MSH5-218ENST00000494646 CELF2-AS1Q8N7Q2 184 aa8□□□□□ -1.13
MSH5-218ENST00000494646 OR56B2PQ8NGI1 322 aa8□□□□□ -1.13
MSH5-218ENST00000494646 Q8TCH9 128 aa8□□□□□ -1.13
MSH5-218ENST00000494646 TAF15Q92804 592 aaKnown RBP eCLIP8□□□□□ -1.13
MSH5-218ENST00000494646 ERGIC1Q969X5 290 aa8□□□□□ -1.13
MSH5-218ENST00000494646 ZMYND19Q96E35 227 aaPredicted RBP8□□□□□ -1.13
MSH5-218ENST00000494646 TECTBQ96PL2 329 aa8□□□□□ -1.13
MSH5-218ENST00000494646 INTS14Q96SY0 518 aa8□□□□□ -1.13
MSH5-218ENST00000494646 AMELYQ99218 206 aa8□□□□□ -1.13
MSH5-218ENST00000494646 ABHD6Q9BV23 337 aa8□□□□□ -1.13
MSH5-218ENST00000494646 SLC22A4Q9H015 551 aa8□□□□□ -1.13
MSH5-218ENST00000494646 C1orf21Q9H246 121 aa8□□□□□ -1.13
MSH5-218ENST00000494646 MMADHCQ9H3L0 296 aaPredicted RBP8□□□□□ -1.13
MSH5-218ENST00000494646 FN3KRPQ9HA64 309 aa8□□□□□ -1.13
MSH5-218ENST00000494646 CMC2Q9NRP2 79 aa8□□□□□ -1.13
MSH5-218ENST00000494646 ZNF319Q9P2F9 582 aa8□□□□□ -1.13
MSH5-218ENST00000494646 IGHV3OR15-7A0A075B7D8 119 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 hCG_1807616A0A1W2PRN6 198 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 A6NLC8 198 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 ANKRD30BLA7E2S9 258 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 ADAM20O43506 726 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms