RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 RNF133Q8WVZ7 376 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 ZMYND19Q96E35 227 aaPredicted RBP13.07□□□□□ -0.32
LIMS2-216ENST00000494613 MIOXQ9UGB7 285 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 INSIG2Q9Y5U4 225 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 FAM20BO75063 409 aa13.06□□□□□ -0.32
LIMS2-216ENST00000494613 IRF2P14316 349 aa13.06□□□□□ -0.32
LIMS2-216ENST00000494613 PAICSP22234 425 aaKnown RBP13.06□□□□□ -0.32
LIMS2-216ENST00000494613 RAD23AP54725 363 aa13.06□□□□□ -0.32
LIMS2-216ENST00000494613 PRAMEF6Q5VXH4 476 aa13.06□□□□□ -0.32
LIMS2-216ENST00000494613 USP43Q70EL4 1123 aa13.06□□□□□ -0.32
LIMS2-216ENST00000494613 RHOUQ7L0Q8 258 aa13.06□□□□□ -0.32
LIMS2-216ENST00000494613 PRSS45Q7RTY3 260 aa13.06□□□□□ -0.32
LIMS2-216ENST00000494613 THEM6Q8WUY1 208 aa13.06□□□□□ -0.32
LIMS2-216ENST00000494613 SPSB4Q96A44 273 aa13.06□□□□□ -0.32
LIMS2-216ENST00000494613 AMELYQ99218 206 aa13.06□□□□□ -0.32
LIMS2-216ENST00000494613 TOR3AQ9H497 397 aa13.06□□□□□ -0.32
LIMS2-216ENST00000494613 MRPL15Q9P015 296 aaKnown RBP13.06□□□□□ -0.32
LIMS2-216ENST00000494613 ZNF319Q9P2F9 582 aa13.06□□□□□ -0.32
LIMS2-216ENST00000494613 NOP16Q9Y3C1 178 aaKnown RBP13.06□□□□□ -0.32
LIMS2-216ENST00000494613 AUP1Q9Y679 476 aa13.06□□□□□ -0.32
LIMS2-216ENST00000494613 A8MXK9 166 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 TBX1O43435 398 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 XRCC2O43543 280 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 FSHBP01225 129 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 APOC1P02654 83 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 ANXA2P07355 339 aaKnown RBP13.05□□□□□ -0.32
LIMS2-216ENST00000494613 GRPP07492 148 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 ZNF12P17014 697 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 HSD11B1P28845 292 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 CD80P33681 288 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 DDOSTP39656 456 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 CX3CR1P49238 355 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 FAM3AP98173 230 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 PAX8Q06710 450 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 ZNF404Q494X3 552 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 KLHL12Q53G59 568 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 LYPD2Q6UXB3 125 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 KLBQ86Z14 1044 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 SPERTQ8NA61 448 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 PLPP7Q8NBV4 271 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 C19orf18Q8NEA5 215 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 OR11L1Q8NGX0 322 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 DVL3Q92997 716 aaPredicted RBP13.05□□□□□ -0.32
LIMS2-216ENST00000494613 UTP4Q969X6 686 aaKnown RBP13.05□□□□□ -0.32
LIMS2-216ENST00000494613 NRBF2Q96F24 287 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 SSBP3Q9BWW4 388 aaPredicted RBP13.05□□□□□ -0.32
LIMS2-216ENST00000494613 SP140LQ9H930 580 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 RNF7Q9UBF6 113 aa13.05□□□□□ -0.32
LIMS2-216ENST00000494613 TIPRLO75663 272 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 PTBP3O95758 552 aaKnown RBP13.04□□□□□ -0.32
LIMS2-216ENST00000494613 H2BFMP0C1H6 154 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 RPS2P15880 293 aaKnown RBP13.04□□□□□ -0.32
LIMS2-216ENST00000494613 FPR2P25090 351 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 OPRL1P41146 370 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 DAPP51397 102 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 HCCSP53701 268 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 CRISP1P54107 249 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 ZNF121P58317 390 aaPredicted RBP13.04□□□□□ -0.32
LIMS2-216ENST00000494613 HOXA4Q00056 320 aaPredicted RBP13.04□□□□□ -0.32
LIMS2-216ENST00000494613 PAX2Q02962 417 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 FAM57BQ71RH2 274 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 SLC16A9Q7RTY1 509 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.04□□□□□ -0.32
LIMS2-216ENST00000494613 SEMA6DQ8NFY4 1073 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 OR56B2PQ8NGI1 322 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 OTOSQ8NHW6 89 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 ZFAND2BQ8WV99 257 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 C22orf15Q8WYQ4 148 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 NEIL1Q96FI4 390 aaPredicted RBP13.04□□□□□ -0.32
LIMS2-216ENST00000494613 REEP6Q96HR9 211 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 PLEKHA8Q96JA3 519 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 OPA3Q9H6K4 179 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 FN3KRPQ9HA64 309 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 BRD7Q9NPI1 651 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 TVP23BQ9NYZ1 205 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 DNAJC27Q9NZQ0 273 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 LRCH1Q9Y2L9 728 aa13.04□□□□□ -0.32
LIMS2-216ENST00000494613 TNFRSF13BO14836 293 aaPredicted RBP13.03□□□□□ -0.32
LIMS2-216ENST00000494613 SELENOFO60613 162 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 HILS1P60008 231 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 GNB2P62879 340 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 SNAPC1Q16533 368 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 TIGD6Q17RP2 521 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 KLF17Q5JT82 389 aaPredicted RBP13.03□□□□□ -0.32
LIMS2-216ENST00000494613 SFRP4Q6FHJ7 346 aaPredicted RBP13.03□□□□□ -0.32
LIMS2-216ENST00000494613 ZNF841Q6ZN19 808 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.03□□□□□ -0.32
LIMS2-216ENST00000494613 ZNF454Q8N9F8 522 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 BOLLQ8N9W6 283 aaKnown RBP13.03□□□□□ -0.32
LIMS2-216ENST00000494613 BBS1Q8NFJ9 593 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 OR52H1Q8NGJ2 320 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 RAB40AQ8WXH6 277 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 TEAD3Q99594 435 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 SLC6A7Q99884 636 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 ADAT1Q9BUB4 502 aaKnown RBP13.03□□□□□ -0.32
LIMS2-216ENST00000494613 TEX12Q9BXU0 123 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 OR5V1Q9UGF6 321 aa13.03□□□□□ -0.32
LIMS2-216ENST00000494613 KIR2DS1A0A191URI9 304 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 ANKRD30BLA7E2S9 258 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 PRODHO43272 600 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms