RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SPRNQ5BIV9 151 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 REP15Q6BDI9 236 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 TEX38Q6PEX7 206 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 ULK3Q6PHR2 472 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 RBMS3Q6XE24 437 aaKnown RBP4.33□□□□□ -1.72
PTCD3-219ENST00000494323 PIWIL3Q7Z3Z3 882 aaKnown RBP4.33□□□□□ -1.72
PTCD3-219ENST00000494323 LRRC18Q8N456 261 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 SLC22A24Q8N4F4 322 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 EIF1ADQ8N9N8 165 aaKnown RBP4.33□□□□□ -1.72
PTCD3-219ENST00000494323 SLC30A7Q8NEW0 376 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 OR4M2Q8NGB6 313 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 OR10S1Q8NGN2 331 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 DNAJA4Q8WW22 397 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-219ENST00000494323 C11orf40Q8WZ69 217 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 SLC38A4Q969I6 547 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 SLC41A3Q96GZ6 507 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 ZBTB18Q99592 522 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 GFI1Q99684 422 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 ULBP2Q9BZM5 246 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 ROPN1BQ9BZX4 212 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF385DQ9H6B1 395 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 OPA3Q9H6K4 179 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF696Q9H7X3 374 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 ROPN1Q9HAT0 212 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-219ENST00000494323 CACYBPQ9HB71 228 aaKnown RBP4.33□□□□□ -1.72
PTCD3-219ENST00000494323 B3GAT2Q9NPZ5 323 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 MMP26Q9NRE1 261 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 AIG1Q9NVV5 245 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 UBAP1Q9NZ09 502 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 OPN4Q9UHM6 478 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 PRDM4Q9UKN5 801 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF346Q9UL40 294 aaKnown RBP4.33□□□□□ -1.72
PTCD3-219ENST00000494323 WIPI2Q9Y4P8 454 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 SOX21Q9Y651 276 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-219ENST00000494323 VWFP04275 2813 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 IGLV3-9A0A075B6K5 115 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 IGHV3OR16-10A0A075B7F0 116 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 ISPDA4D126 451 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 C5orf58C9J3I9 102 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 TRAPPC2LH3BP13 241 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 J3QLI3 93 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 UBL3O95164 117 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 IGKV2-30P06310 120 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 SBK2P0C263 348 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 ZCCHC18P0CG32 403 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF250P15622 560 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 OMGP23515 440 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 PRTN3P24158 256 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 PCGF2P35227 344 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 AMTP48728 403 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 POLR2JP52435 117 aaKnown RBP4.32□□□□□ -1.72
PTCD3-219ENST00000494323 UCP2P55851 309 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 KLF3P57682 345 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-219ENST00000494323 PUDPQ08623 228 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 LRRC74AQ0VAA2 488 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 BST1Q10588 318 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 BAMBIQ13145 260 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 OR1Q1Q15612 314 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 SPATA46Q5T0L3 261 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 THEM4Q5T1C6 240 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 TRAT1Q6PIZ9 186 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 C6orf89Q6UWU4 347 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 SLC35D2Q76EJ3 337 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 SNX32Q86XE0 403 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 C10orf111Q8N326 155 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 TEX29Q8N6K0 151 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 LRRC17Q8N6Y2 441 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 RBM15BQ8NDT2 890 aaKnown RBP4.32□□□□□ -1.72
PTCD3-219ENST00000494323 OR4K5Q8NGD3 323 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 OR9I1Q8NGQ6 314 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF519Q8TB69 540 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 RAB1CQ92928 201 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 TMEM54Q969K7 222 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 LRRC58Q96CX6 371 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 RAB39BQ96DA2 213 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 SLC47A1Q96FL8 570 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 TIMD4Q96H15 378 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 ITCHQ96J02 903 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 C1orf147Q96MC9 270 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-219ENST00000494323 DDOQ99489 341 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 GAL3ST1Q99999 423 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 MMP27Q9H306 513 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 CENPHQ9H3R5 247 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 NTN4Q9HB63 628 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 TMEM27Q9HBJ8 222 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 CDH20Q9HBT6 801 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 BCL2L10Q9HD36 194 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 SLCO1C1Q9NYB5 712 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 TAS2R5Q9NYW4 299 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 GLTPQ9NZD2 209 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 SLC7A8Q9UHI5 535 aa4.32□□□□□ -1.72
PTCD3-219ENST00000494323 LEF1Q9UJU2 399 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-219ENST00000494323 A0A0B4J2E0 115 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 IQCMA0A1B0GVH7 501 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 A0A1B0GX12 115 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 TRPC5OSA6NMA1 111 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 CLDN25C9JDP6 229 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 UBDO15205 165 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 HDAC3O15379 428 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 RGS16O15492 202 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms