RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 G3V3Y1 287 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 TSPAN4O14817 238 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 NKX2-8O15522 239 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 SELENOFO60613 162 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 ARL6IP5O75915 188 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 PGA4P0DJD7 388 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 PGA3P0DJD8 388 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 NDUFB7P17568 137 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 LAP3P28838 519 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 NAA10P41227 235 aaPredicted RBP5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 RORCP51449 518 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 NCS1P62166 190 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 LSM6P62312 80 aaKnown RBP5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 SLC17A1Q14916 467 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 CDK5R1Q15078 307 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 MRPL23Q16540 153 aaKnown RBP5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 ZNF404Q494X3 552 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 C10orf128Q5T292 105 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 ZNF684Q5T5D7 378 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 ABLIM2Q6H8Q1 611 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 SLC25A47Q6Q0C1 308 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 UTS2BQ765I0 119 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 GGNQ86UU5 652 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 OR9K2Q8NGE7 335 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 RPS4Y2Q8TD47 263 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 TMEM54Q969K7 222 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 TMEM45BQ96B21 275 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 SMIM19Q96E16 107 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 MISP3Q96FF7 219 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 C7orf50Q9BRJ6 194 aaKnown RBP5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 HMG20AQ9NP66 347 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 PARPBPQ9NWS1 579 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 TXNL4BQ9NX01 149 aaKnown RBP5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 MYEF2Q9P2K5 600 aaKnown RBP5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 EIF3KQ9UBQ5 218 aaKnown RBP5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 MCTS1Q9ULC4 181 aaKnown RBP5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 PEX16Q9Y5Y5 336 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 EML6Q6ZMW3 1958 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 A0A0G2JMM0 328 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 PNMA8CA0A1B0GUJ8 204 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 A0A1W2PPB8 328 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 A0A1W2PRS3 328 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 KIR3DP1A8MWS1 328 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 ZNF593O00488 134 aaPredicted RBP5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 TNFSF11O14788 317 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 WISP1O95388 367 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 CTXN2P0C2S0 81 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 CSNK1A1P48729 337 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 ZNF84P51523 738 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 CCL11P51671 97 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 MELKQ14680 651 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 PDLIM3Q53GG5 364 aaPredicted RBP5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 YIF1BQ5BJH7 314 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 WIPI1Q5MNZ9 446 aaPredicted RBP5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 CHMP1BQ7LBR1 199 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 GPAT4Q86UL3 456 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 LYSMD2Q8IV50 215 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 ZADH2Q8N4Q0 377 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 TMEM251Q8N6I4 163 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 ZNF511Q8NB15 262 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 BEND2Q8NDZ0 799 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 SLC26A10Q8NG04 563 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 LRRC20Q8TCA0 184 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 ZPLD1Q8TCW7 415 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 PELI1Q96FA3 418 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 UBL7Q96S82 380 aaPredicted RBP5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 TBX5Q99593 518 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 TIMP4Q99727 224 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 COMMD4Q9H0A8 199 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 TMEM185BQ9H7F4 350 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 IFT46Q9NQC8 304 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 PLA2G3Q9NZ20 509 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 GNG8Q9UK08 70 aa5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 KLF2Q9Y5W3 355 aaPredicted RBP5.92□□□□□ -1.46
FNDC3B-212ENST00000494000 IGKV3D-15A0A087WSY6 115 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 A0A0G2JMP0 313 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 A0A0X1KG70 313 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 TMEM212A6NML5 194 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 APOC1P02654 83 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 CELA3BP08861 270 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 RFPL3SP0C7P2 107 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 FCGR2AP12318 317 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 HLA-DOBP13765 273 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 CPN1P15169 458 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 CTLA4P16410 223 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 ZNF708P17019 499 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 NPR2P20594 1047 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 MYL9P24844 172 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 EDNRAP25101 427 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 SHC1P29353 583 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 BDKRB2P30411 391 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 ALDH3B1P43353 468 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 MMP16P51512 607 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 UCNP55089 124 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 CLDN17P56750 224 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 OR12D2P58182 307 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 HERV-K104P63124 156 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 ADAM8P78325 824 aa5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 DBPQ10586 325 aaPredicted RBP5.91□□□□□ -1.46
FNDC3B-212ENST00000494000 ZNF846Q147U1 533 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms