RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 CD74P04233 296 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 CD14P08571 375 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 VSIG10L2P0DP72 767 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 CLUP10909 449 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 RAB6AP20340 208 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 PAX6P26367 422 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 DCTDP32321 178 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 RPL4P36578 427 aaKnown RBP9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 STARP49675 285 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 GSK3AP49840 483 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 H2BFSP57053 126 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 RAB38P57729 211 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 SERTAD2Q14140 314 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 GRM7Q14831 915 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 RAB11BQ15907 218 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 RNFT1Q5M7Z0 435 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 PDSS1Q5T2R2 415 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 FCRLBQ6BAA4 426 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 STEAP1BQ6NZ63 245 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 ACOT7LQ6ZUV0 252 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 ESPNLQ6ZVH7 1005 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 CD163Q86VB7 1156 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 CYB561A3Q8NBI2 242 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 OR10K1Q8NGX5 313 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 OR4K13Q8NH42 304 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 RGP1Q92546 391 aaPredicted RBP9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 RIT1Q92963 219 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 FBXW5Q969U6 566 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 RERGQ96A58 199 aaPredicted RBP9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 OR2A5Q96R48 311 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 PRRT1Q99946 306 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 EXO5Q9H790 373 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 WDR76Q9H967 626 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 SYNPO2LQ9H987 977 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 ZNF304Q9HCX3 659 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 KCNE5Q9UJ90 142 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 TNFSF18Q9UNG2 199 aa9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 CARHSP1Q9Y2V2 147 aaKnown RBP9.39□□□□□ -0.91
PDLIM1-205ENST00000493949 A0A0B4J203 849 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 TMEM82A0PJX8 343 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 OR4C45A6NMZ5 311 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 A6NNC1 897 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 DISC1C4P0D8 188 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 DOK2O60496 412 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 CTSVO60911 334 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 NTN1O95631 604 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 WNT11O96014 354 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 RENP00797 406 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 AVPP01185 164 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 RLN1P04808 185 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 IFNA4P05014 189 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 CD2P06729 351 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 GTF2F2P13984 249 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 CD46P15529 392 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 FUT1P19526 365 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 GABRA3P34903 492 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 NAA10P41227 235 aaPredicted RBP9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 EMP2P54851 167 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 TAS2R31P59538 309 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 B2MP61769 119 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 SNRPNP63162 240 aaKnown RBP9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 EIF5AP63241 154 aaKnown RBP9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 NKX6-1P78426 367 aaPredicted RBP9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 CYCSP99999 105 aaKnown RBP9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 MGAT2Q10469 447 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 FAM189A2Q15884 450 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 MICBQ29980 383 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 PAN3Q58A45 887 aaKnown RBP9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 ACER2Q5QJU3 275 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 C10orf91Q5T1B1 145 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 AWAT2Q6E213 333 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 FAM166AQ6J272 317 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 LRFN4Q6PJG9 635 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 RNF44Q7L0R7 432 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 ZNF546Q86UE3 836 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 SKA3Q8IX90 412 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 IZUMO1Q8IYV9 350 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 SPAG16Q8N0X2 631 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 BEST3Q8N1M1 668 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 MUC20Q8N307 709 aaPredicted RBP9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 NKAIN3Q8N8D7 197 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 DTX3Q8N9I9 347 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 OR5M1Q8NGP8 315 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 OR1J4Q8NGS1 313 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 FOXRED1Q96CU9 486 aaPredicted RBP9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 NPAS1Q99742 590 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 ZFYVE21Q9BQ24 234 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 BEX1Q9HBH7 125 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 BARX1Q9HBU1 254 aaPredicted RBP9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 Q9N2J8 555 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 TMEM138Q9NPI0 162 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 BEX4Q9NWD9 120 aaPredicted RBP9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 HPF1Q9NWY4 346 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 CKLFQ9UBR5 152 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 COPS3Q9UNS2 423 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 ERVK-19Q9WJR5 959 aa9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 MRPS33Q9Y291 106 aaKnown RBP9.38□□□□□ -0.91
PDLIM1-205ENST00000493949 IGHV3-20A0A0C4DH32 117 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 CENPVL1A0A0U1RR11 272 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms