RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 JAM3Q9BX67 310 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 SP140LQ9H930 580 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 E9PI62 339 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 XRCC2O43543 280 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 TTRP02766 147 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 TACSTD2P09758 323 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 KITLGP21583 273 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 PTH2RP49190 550 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 ATP5J2P56134 94 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 Q6ZR03 302 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 COMMD2Q86X83 199 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 PRSS35Q8N3Z0 413 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 SPRYD4Q8WW59 207 aaPredicted RBP15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 SPSB4Q96A44 273 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 ZNF701Q9NV72 531 aaPredicted RBP15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 BEX4Q9NWD9 120 aaPredicted RBP15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 SCN3BQ9NY72 215 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 ERVK-18Q9QC07 812 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 NUFIP1Q9UHK0 495 aaKnown RBP15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 SNX5Q9Y5X3 404 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 PLSCR5A0PG75 271 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 GGT3PA6NGU5 568 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 CD300LBA8K4G0 201 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 H7C417 338 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 SPRY3O43610 288 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 IGHV4-39P01824 125 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 CRHBPP24387 322 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 PPOXP50336 477 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 NANOS3P60323 173 aaKnown RBP15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 CSNK2BP67870 215 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 FAM3AP98173 230 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 WDR38Q5JTN6 314 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 KCTD20Q7Z5Y7 419 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 CATSPERDQ86XM0 798 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 OR56B2PQ8NGI1 322 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 MBD6Q96DN6 1003 aa15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 EXOSC1Q9Y3B2 195 aaKnown RBP15.25■□□□□ 0.03
PDLIM7-208ENST00000493815 hCG_38984A0A1B0GV85 526 aa15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 CDK1P06493 297 aa15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 MAGEB1P43366 347 aa15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 GSK3AP49840 483 aa15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 ZNF81P51508 661 aa15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 GTF2A1P52655 376 aaPredicted RBP15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 TNK1Q13470 666 aa15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 RDH10Q8IZV5 341 aa15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 SYS1Q8N2H4 156 aa15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 GATAD2BQ8WXI9 593 aa15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 MRPL48Q96GC5 212 aaKnown RBP15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 FAM71F1Q96KD3 344 aaPredicted RBP15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 GPR84Q9NQS5 396 aa15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 GPR160Q9UJ42 338 aa15.24■□□□□ 0.03
PDLIM7-208ENST00000493815 ARID1AO14497 2285 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 ACOD1A6NK06 481 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 C17orf100A8MU93 164 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 IQCF6A8MYZ5 107 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 P2RY10O00398 339 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 HLA-DPB1P04440 258 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 CCDC159P0C7I6 412 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 KIR3DL2P43630 455 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 SLC35A2P78381 396 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 CCL8P80075 99 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 MOGQ16653 247 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 TSTQ16762 297 aaKnown RBP15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 XAF1Q6GPH4 301 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 ELMOD2Q8IZ81 293 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 KLHL36Q8N4N3 616 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 OR8G5Q8NG78 346 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 OR2G2Q8NGZ5 317 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 TRMT61AQ96FX7 289 aaKnown RBP15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 GSX2Q9BZM3 304 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 MS4A5Q9H3V2 200 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 RGCCQ9H4X1 137 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 PPP1R3EQ9H7J1 279 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 CHCHD3Q9NX63 227 aaKnown RBP15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 FRRS1LQ9P0K9 344 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 CAB39Q9Y376 341 aaPredicted RBP15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 TPRKBQ9Y3C4 175 aa15.23■□□□□ 0.03
PDLIM7-208ENST00000493815 A0A0U1RQV5 110 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 H0YL77 283 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 IGHV1-46P01743 117 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 MT-ND5P03915 603 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 ACKR3P25106 362 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 ART1P52961 327 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 HNRNPA0Q13151 305 aaKnown RBP15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 MED21Q13503 144 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 DOC2BQ14184 412 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 SPRNQ5BIV9 151 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 KLBQ86Z14 1044 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 OR2Z1Q8NG97 314 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 OR10AD1Q8NGE0 317 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 DVL3Q92997 716 aaPredicted RBP15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 MYDGFQ969H8 173 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 DUSP21Q9H596 190 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 MOB1AQ9H8S9 216 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 IGHV3-64DA0A0J9YX35 117 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 LALBAP00709 142 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 HTR1AP08908 422 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 SELEP16581 610 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 CA6P23280 308 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 RBMXP38159 391 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms