RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 CDCA4Q9BXL8 241 aa10.48□□□□□ -0.73
UPF3A-210ENST00000493727 HDHD2Q9H0R4 259 aa10.48□□□□□ -0.73
UPF3A-210ENST00000493727 FBXL3Q9UKT7 428 aa10.48□□□□□ -0.73
UPF3A-210ENST00000493727 CAB39Q9Y376 341 aaPredicted RBP10.48□□□□□ -0.73
UPF3A-210ENST00000493727 TMEM129A0AVI4 362 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 METTL15A6NJ78 407 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 HTR1AP08908 422 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 ADRA2AP08913 450 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 MMP7P09237 267 aaPredicted RBP10.47□□□□□ -0.73
UPF3A-210ENST00000493727 LIMS3P0CW19 117 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 LIMS4P0CW20 117 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 APLNRP35414 380 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 IDH3GP51553 393 aaPredicted RBP10.47□□□□□ -0.73
UPF3A-210ENST00000493727 GRB2P62993 217 aaKnown RBP10.47□□□□□ -0.73
UPF3A-210ENST00000493727 PSG4Q00888 419 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 ECH1Q13011 328 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 MED22Q15528 200 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 TBCEQ15813 527 aaPredicted RBP10.47□□□□□ -0.73
UPF3A-210ENST00000493727 CCDC92Q53HC0 331 aaPredicted RBP10.47□□□□□ -0.73
UPF3A-210ENST00000493727 RNLSQ5VYX0 342 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 DTX2Q86UW9 622 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 ZNF679Q8IYX0 411 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 SPARTQ8N0X7 666 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 WDR31Q8NA23 367 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 KBTBD8Q8NFY9 601 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 OR52N1Q8NH53 320 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 OR1F12Q8NHA8 337 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 SPRYD4Q8WW59 207 aaPredicted RBP10.47□□□□□ -0.73
UPF3A-210ENST00000493727 SPTSSAQ969W0 71 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 AMELYQ99218 206 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 ATF6BQ99941 703 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 MRPS26Q9BYN8 205 aaKnown RBP10.47□□□□□ -0.73
UPF3A-210ENST00000493727 REG4Q9BYZ8 158 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 WNT5BQ9H1J7 359 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 ELOVL3Q9HB03 270 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 NOX3Q9HBY0 568 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 ACOXLQ9NUZ1 547 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 SLCO1C1Q9NYB5 712 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 CISD1Q9NZ45 108 aaKnown RBP10.47□□□□□ -0.73
UPF3A-210ENST00000493727 ZNF224Q9NZL3 707 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 SCOCQ9UIL1 159 aa10.47□□□□□ -0.73
UPF3A-210ENST00000493727 ZNF503-AS2A6NEH8 195 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 OR6C6A6NF89 314 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 DPRXA6NFQ7 191 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 RNF212BA8MTL3 300 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 PRR32B1ATL7 298 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 F5H5K5 113 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 MAGEB4O15481 346 aaPredicted RBP10.46□□□□□ -0.73
UPF3A-210ENST00000493727 ZNF254O75437 659 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 SULT1C4O75897 302 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 RPP14O95059 124 aaKnown RBP10.46□□□□□ -0.73
UPF3A-210ENST00000493727 PTHP01270 115 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 CBR1P16152 277 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 PTAFRP25105 342 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 OPRL1P41146 370 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 GDI2P50395 445 aaKnown RBP10.46□□□□□ -0.73
UPF3A-210ENST00000493727 GBX2P52951 348 aaPredicted RBP10.46□□□□□ -0.73
UPF3A-210ENST00000493727 WNT4P56705 351 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 OR12D2P58182 307 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 HIST1H3AP68431 136 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 GALK2Q01415 458 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 IRF3Q14653 427 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 RAB39AQ14964 217 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 NEDD8Q15843 81 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 ZNF829Q3KNS6 432 aaPredicted RBP10.46□□□□□ -0.73
UPF3A-210ENST00000493727 CDONQ4KMG0 1287 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 HIST2H3PS2Q5TEC6 136 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 OR2G6Q5TZ20 316 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 AGAP6Q5VW22 663 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 ZNF544Q6NX49 715 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 TMEM108Q6UXF1 575 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 KCTD8Q6ZWB6 473 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 HIST2H3AQ71DI3 136 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 ZNF367Q7RTV3 350 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 KCTD20Q7Z5Y7 419 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 SYS1Q8N2H4 156 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 ZNF283Q8N7M2 679 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 NANOGP1Q8N7R0 232 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 OR10S1Q8NGN2 331 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 FCGR1BQ92637 280 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 RORBQ92753 470 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 SIGLEC11Q96RL6 698 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 COQ7Q99807 217 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 TRAF4Q9BUZ4 470 aaPredicted RBP10.46□□□□□ -0.73
UPF3A-210ENST00000493727 C1QTNF6Q9BXI9 259 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 PNRC2Q9NPJ4 139 aaKnown RBP10.46□□□□□ -0.73
UPF3A-210ENST00000493727 B3GNT2Q9NY97 397 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 MRM2Q9UI43 246 aaKnown RBP10.46□□□□□ -0.73
UPF3A-210ENST00000493727 GTF2A1LQ9UNN4 478 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 LRP12Q9Y561 859 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 SLC25A15Q9Y619 301 aa10.46□□□□□ -0.73
UPF3A-210ENST00000493727 YLPM1P49750 1951 aaKnown RBP10.45□□□□□ -0.74
UPF3A-210ENST00000493727 SHISA9B4DS77 424 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 M0R1B8 84 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 APOC1P02654 83 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 LCKP06239 509 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 HSMCR30P0CW71 290 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 SMIM18P0DKX4 95 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 CCNOP22674 350 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 APEX1P27695 318 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms