RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 PCDHGB1Q9Y5G3 927 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 FAM183AA6NL82 134 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 PRTN3P24158 256 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 CX3CR1P49238 355 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 SLC25A1P53007 311 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 FGF12P61328 243 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 TRIM25Q14258 630 aaKnown RBP12.2□□□□□ -0.46
ATG4B-223ENST00000493618 OR8B8Q15620 311 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 FAM98BQ52LJ0 330 aaKnown RBP12.2□□□□□ -0.46
ATG4B-223ENST00000493618 BRD3OSQ6XYD6 125 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 ZNF841Q6ZN19 808 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 ERI1Q8IV48 349 aaKnown RBP12.2□□□□□ -0.46
ATG4B-223ENST00000493618 OR10G2Q8NGC3 310 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 OR6N2Q8NGY6 317 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 ERGIC1Q969X5 290 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 DACT3Q96B18 629 aaPredicted RBP12.2□□□□□ -0.46
ATG4B-223ENST00000493618 UPRTQ96BW1 309 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 CCDC124Q96CT7 223 aaKnown RBP12.2□□□□□ -0.46
ATG4B-223ENST00000493618 TECTBQ96PL2 329 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 DGCR6LQ9BY27 220 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 RASSF4Q9H2L5 321 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 CTSZQ9UBR2 303 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 BAIAP2Q9UQB8 552 aa12.2□□□□□ -0.46
ATG4B-223ENST00000493618 IGHV3OR15-7A0A075B7D8 119 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 KIR2DS1A0A191URI9 304 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 DHRS12A0PJE2 317 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 A6NLC8 198 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 RIIAD1A6NNX1 92 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 C22orf46C9J442 243 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 ZNF878C9JN71 531 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 GMDSO60547 372 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 IFNGP01579 166 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 ANXA2P07355 339 aaKnown RBP12.19□□□□□ -0.46
ATG4B-223ENST00000493618 T-ENOLP0DO92 83 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 HKR1P10072 659 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 EGR1P18146 543 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 POU4F2Q12837 409 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 SLC9A3R2Q15599 337 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 PCK2Q16822 640 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 LINC01590Q5TEZ4 76 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 LRGUKQ96M69 825 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 AMELYQ99218 206 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 SLC22A4Q9H015 551 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 MUC13Q9H3R2 512 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 PPP1R3EQ9H7J1 279 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 DNAJC27Q9NZQ0 273 aa12.19□□□□□ -0.46
ATG4B-223ENST00000493618 MRPL15Q9P015 296 aaKnown RBP12.19□□□□□ -0.46
ATG4B-223ENST00000493618 NOP16Q9Y3C1 178 aaKnown RBP12.19□□□□□ -0.46
ATG4B-223ENST00000493618 hCG_1807616A0A1W2PRN6 198 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 H3BN98 237 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 LGALS8O00214 317 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 PHYHO14832 338 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 ADAM20O43506 726 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 FSTL3O95633 263 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 PLATP00750 562 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 GYPAP02724 150 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 ZNF3P17036 446 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 CPT2P23786 658 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 HSD11B1P28845 292 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 PSMB10P40306 273 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 TIGD6Q17RP2 521 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 GFOD2Q3B7J2 385 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 TEX30Q5JUR7 227 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 RUSC1-AS1Q66K80 236 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 DPY19L4Q7Z388 723 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 TMEM179BQ7Z7N9 219 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 ARHGAP24Q8N264 748 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 TEX47Q8TBZ9 253 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 GIPC3Q8TF64 312 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 ZMYND19Q96E35 227 aaPredicted RBP12.18□□□□□ -0.46
ATG4B-223ENST00000493618 INTS14Q96SY0 518 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 FEVQ99581 238 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 PCGF1Q9BSM1 259 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 BRD7Q9NPI1 651 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 CMC2Q9NRP2 79 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 TNFRSF19Q9NS68 423 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 TAS2R1Q9NYW7 299 aa12.18□□□□□ -0.46
ATG4B-223ENST00000493618 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-223ENST00000493618 OOEPA6NGQ2 149 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 ANKRD30BLA7E2S9 258 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 XRCC2O43543 280 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 SPRY1O43609 319 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-223ENST00000493618 PTBP3O95758 552 aaKnown RBP12.17□□□□□ -0.46
ATG4B-223ENST00000493618 CST1P01037 141 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 SFTPBP07988 381 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 PPIAL4GP0DN37 164 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 RAP2AP10114 183 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 CALB2P22676 271 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 POU1F1P28069 291 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 GSTT1P30711 240 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 GRK5P34947 590 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 MTNR1AP48039 350 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 GRB2P62993 217 aaKnown RBP12.17□□□□□ -0.46
ATG4B-223ENST00000493618 ELF3P78545 371 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-223ENST00000493618 FOXL1Q12952 345 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 DEFB112Q30KQ8 113 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 FAM57BQ71RH2 274 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 SLC16A9Q7RTY1 509 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 WDR86Q86TI4 376 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 CCDC197Q8NCU1 140 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms