RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 MRPL21Q7Z2W9 205 aaKnown RBP8.95□□□□□ -0.98
COL6A3-214ENST00000493608 DPY19L4Q7Z388 723 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 ERI1Q8IV48 349 aaKnown RBP8.95□□□□□ -0.98
COL6A3-214ENST00000493608 KLHL36Q8N4N3 616 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 RFLNBQ8N5W9 214 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 OR4M2Q8NGB6 313 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 SPRYD4Q8WW59 207 aaPredicted RBP8.95□□□□□ -0.98
COL6A3-214ENST00000493608 POP5Q969H6 163 aaKnown RBP8.95□□□□□ -0.98
COL6A3-214ENST00000493608 C7orf69Q9H7B7 122 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 PATZ1Q9HBE1 687 aaKnown RBP8.95□□□□□ -0.98
COL6A3-214ENST00000493608 TMEM165Q9HC07 324 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 DDX28Q9NUL7 540 aaKnown RBP8.95□□□□□ -0.98
COL6A3-214ENST00000493608 POMPQ9Y244 141 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 GGT3PA6NGU5 568 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 CD300LBA8K4G0 201 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 GSC2O15499 205 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 TBX1O43435 398 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 FKBP6O75344 327 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 TIPRLO75663 272 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 GSTT1P30711 240 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 OTX1P32242 354 aaPredicted RBP8.94□□□□□ -0.98
COL6A3-214ENST00000493608 GRK5P34947 590 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 OR8G1Q15617 311 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 MPPED2Q15777 294 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 PCK2Q16822 640 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 TMEM155Q4W5P6 130 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 KLHL12Q53G59 568 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 TEX30Q5JUR7 227 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 PLBD1Q6P4A8 553 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 DRAM2Q6UX65 266 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 SPICQ8N5J4 248 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 OR6N2Q8NGY6 317 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 C22orf15Q8WYQ4 148 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 ZMYND19Q96E35 227 aaPredicted RBP8.94□□□□□ -0.98
COL6A3-214ENST00000493608 INTS14Q96SY0 518 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 AMELYQ99218 206 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 KCNJ15Q99712 375 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 CADM1Q9BY67 442 aaKnown RBP8.94□□□□□ -0.98
COL6A3-214ENST00000493608 DNAJC27Q9NZQ0 273 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 OPN4Q9UHM6 478 aa8.94□□□□□ -0.98
COL6A3-214ENST00000493608 TCRBV3S1A0A5B6 114 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 CEACAM18A8MTB9 384 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 ZNF878C9JN71 531 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 PRR23D1E9PI22 279 aaPredicted RBP8.93□□□□□ -0.98
COL6A3-214ENST00000493608 FAM20BO75063 409 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 FOXH1O75593 365 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 GLCEO94923 617 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 ANXA2P07355 339 aaKnown RBP8.93□□□□□ -0.98
COL6A3-214ENST00000493608 PRR23D2P0DMB1 279 aaPredicted RBP8.93□□□□□ -0.98
COL6A3-214ENST00000493608 OSMP13725 252 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 HSD11B1P28845 292 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 MDH2P40926 338 aaKnown RBP8.93□□□□□ -0.98
COL6A3-214ENST00000493608 CX3CR1P49238 355 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 RAD23AP54725 363 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 CDK5Q00535 292 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 CPOQ8IVL8 374 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 BOLLQ8N9W6 283 aaKnown RBP8.93□□□□□ -0.98
COL6A3-214ENST00000493608 DEFB108BQ8NET1 73 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 BBS1Q8NFJ9 593 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 TMEM246Q9BRR3 403 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 ABHD6Q9BV23 337 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 ZNF556Q9HAH1 456 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 NTN4Q9HB63 628 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 DNAJB9Q9UBS3 223 aa8.93□□□□□ -0.98
COL6A3-214ENST00000493608 PPIAL4EA0A075B759 164 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 A0A1B0GWJ7 208 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 ARRDC5A6NEK1 342 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 F5H0A9 414 aaPredicted RBP8.92□□□□□ -0.98
COL6A3-214ENST00000493608 PPIAL4DF5H284 164 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 J3QLI3 93 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 SELENOFO60613 162 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 GRPP07492 148 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 WNT2P09544 360 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 PPIAL4FP0DN26 164 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 ANXA8P13928 327 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 IRF2P14316 349 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 RPS2P15880 293 aaKnown RBP8.92□□□□□ -0.98
COL6A3-214ENST00000493608 PAICSP22234 425 aaKnown RBP8.92□□□□□ -0.98
COL6A3-214ENST00000493608 CD200P41217 278 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 NAA10P41227 235 aaPredicted RBP8.92□□□□□ -0.98
COL6A3-214ENST00000493608 BLVRAP53004 296 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 HCCSP53701 268 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 ZNF121P58317 390 aaPredicted RBP8.92□□□□□ -0.98
COL6A3-214ENST00000493608 GK3PQ14409 553 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 GFOD2Q3B7J2 385 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 SFRP4Q6FHJ7 346 aaPredicted RBP8.92□□□□□ -0.98
COL6A3-214ENST00000493608 LYPD2Q6UXB3 125 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 FAM57BQ71RH2 274 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 C1QL2Q7Z5L3 287 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 KLBQ86Z14 1044 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 TIGD4Q8IY51 512 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 MUC20Q8N307 709 aaPredicted RBP8.92□□□□□ -0.98
COL6A3-214ENST00000493608 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.92□□□□□ -0.98
COL6A3-214ENST00000493608 PAPD5Q8NDF8 572 aaKnown RBP8.92□□□□□ -0.98
COL6A3-214ENST00000493608 OR56B2PQ8NGI1 322 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 NANPQ8TBE9 248 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 THEM6Q8WUY1 208 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 SGK3Q96BR1 496 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 SLC6A7Q99884 636 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 ADAT1Q9BUB4 502 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms