RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TNK1Q13470 666 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CAMK2DQ13557 499 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 VEZF1Q14119 521 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CASP8Q14790 479 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 MAD2L1BPQ15013 274 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 OR7A5Q15622 319 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 ZNHIT3Q15649 155 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 NPTX1Q15818 432 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 ALKBH6Q3KRA9 238 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 FBXL19-AS1Q494R0 122 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 IGSF11Q5DX21 431 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 TNFAIP8L3Q5GJ75 292 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 TMEM255AQ5JRV8 349 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 BEND6Q5SZJ8 279 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 TSPO2Q5TGU0 170 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 HHATQ5VTY9 493 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CARD17Q5XLA6 110 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 SAXO2Q658L1 398 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 EMBQ6PCB8 327 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 SHQ1Q6PI26 577 aaKnown RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 TRAT1Q6PIZ9 186 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CASP12Q6UXS9 341 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 WDR88Q6ZMY6 472 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 RGS9BPQ6ZS82 235 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF621Q6ZSS3 439 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 MSANTD1Q6ZTZ1 278 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 FCRLAQ7L513 359 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 C16orf62Q7Z3J2 963 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 PIWIL3Q7Z3Z3 882 aaKnown RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 FUNDC1Q8IVP5 155 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 PHC2Q8IXK0 858 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 MICU2Q8IYU8 434 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CLYBLQ8N0X4 340 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 GABRG1Q8N1C3 465 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 GTPBP8Q8N3Z3 284 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF525Q8N782 197 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 KLHDC1Q8N7A1 406 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CLDN22Q8N7P3 220 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CDRT4Q8N9R6 151 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 SMYD1Q8NB12 490 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 SLC37A3Q8NCC5 494 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 TSPAN14Q8NG11 270 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 OR5P2Q8WZ92 322 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 OSTF1Q92882 214 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 PTP4A1Q93096 173 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 TLCD1Q96CP7 247 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 SLC25A36Q96CQ1 311 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 ZBED6CLQ96FA7 236 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 PPP3R2Q96LZ3 170 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 EMC6Q9BV81 110 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 SFXN3Q9BWM7 321 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF350Q9GZX5 532 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 PARLQ9H300 379 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 PIGUQ9H490 435 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 NARFLQ9H6Q4 476 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 MTHFD2LQ9H903 347 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 TMBIM4Q9HC24 238 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF446Q9NWS9 450 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 QPCTLQ9NXS2 382 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 FETUBQ9UGM5 382 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 TMED7Q9Y3B3 224 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 WDR45Q9Y484 360 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 HIVEP2P31629 2446 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 A0A096LNT2 108 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 TRAV34A0A0B4J273 112 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 A0A0U1RQK1 487 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF320A2RRD8 509 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 LRP5LA4QPB2 252 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 SNURFLB1AK76 121 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 TMEM114B3SHH9 223 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 E7EQL1 145 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 C11orf98E9PRG8 122 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 H3BQF6 201 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 H7C1C5 153 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 KIF2AO00139 706 aaPredicted RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 SULT2B1O00204 365 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ABCD4O14678 606 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF264O43296 627 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 TBX19O60806 448 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 SNNO75324 88 aaPredicted RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 SYNGR4O95473 234 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 CD8AP01732 235 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 THY1P04216 161 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 FGF4P08620 206 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 SMIM18P0DKX4 95 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 CCL2P13500 99 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 HPGDP15428 266 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 LBPP18428 481 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ATP6V1C1P21283 382 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 IL32P24001 234 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 CALCRP30988 508 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 S100A3P33764 101 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 SERPINB5P36952 375 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 RPS5P46782 204 aaKnown RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 YAP1P46937 504 aaKnown RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 KHKP50053 298 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 RPL14P50914 215 aaKnown RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 IDH3GP51553 393 aaPredicted RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 P2RX1P51575 399 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ARFIP1P53367 373 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms