RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	PRPF19	Q9UMS4	504 aa	Known RBP	15.69	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	A4GNT	Q9UNA3	340 aa		15.69	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	SF3B6	Q9Y3B4	125 aa	Known RBP	15.69	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	GGT3P	A6NGU5	568 aa		15.68	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	GRK5	P34947	590 aa		15.68	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	KRR1	Q13601	381 aa	Known RBP	15.68	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	BLMH	Q13867	455 aa		15.68	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	LRRC75B	Q2VPJ9	315 aa		15.68	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	LRRC10	Q5BKY1	277 aa		15.68	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	WDR38	Q5JTN6	314 aa		15.68	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	CRIP3	Q6Q6R5	217 aa		15.68	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	LIAT1	Q6ZQX7	453 aa		15.68	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	C8orf46	Q8TAG6	207 aa		15.68	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	CITED2	Q99967	270 aa	Predicted RBP	15.68	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	RNPEPL1	Q9HAU8	725 aa		15.68	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	MRPL15	Q9P015	296 aa	Known RBP	15.68	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334		M0R1W7	72 aa		15.67	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	PPP1R3D	O95685	299 aa		15.67	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	CRABP1	P29762	137 aa		15.67	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	SDHA	P31040	664 aa		15.67	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	TPTE	P56180	551 aa		15.67	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	MEP1B	Q16820	701 aa		15.67	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	TSEN54	Q7Z6J9	526 aa	Known RBP	15.67	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	PAPD5	Q8NDF8	572 aa	Known RBP	15.67	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	LZIC	Q8WZA0	190 aa		15.67	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	H1FX	Q92522	213 aa	Known RBP	15.67	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	NKX3-1	Q99801	234 aa	Predicted RBP	15.67	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	ATF6B	Q99941	703 aa		15.67	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	FNDC11	Q9BVV2	318 aa		15.67	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334		A0A1B0GW55	424 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	ADARB2-AS1	A8MUL3	147 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	PEX14	O75381	377 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	DUX4L2	P0CJ85	424 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	DUX4L3	P0CJ86	424 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	DUX4L4	P0CJ87	422 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	DUX4L5	P0CJ88	424 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	DUX4L6	P0CJ89	424 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	DUX4L7	P0CJ90	424 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	MDH1	P40925	334 aa	Known RBP	15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	TRAP1	Q12931	704 aa	Known RBP	15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	IKZF1	Q13422	519 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	TRAM2	Q15035	370 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	PCK2	Q16822	640 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	WDR93	Q6P2C0	686 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	DNM1P34	Q6PK57	102 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	DUX4L9	Q6RFH8	374 aa	Predicted RBP	15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	TMPRSS11F	Q6ZWK6	438 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	ADCK1	Q86TW2	530 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	OR2AJ1	Q8NGZ0	328 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	RORB	Q92753	470 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	SERTAD4	Q9NUC0	356 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	DUX4	Q9UBX2	424 aa		15.66	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	WI2-2373I1.2	A0A1W2PRP0	233 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	BHLHE40	O14503	412 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	SOCS2	O14508	198 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	CDC42EP2	O14613	210 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	MSX2	P35548	267 aa	Predicted RBP	15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	TGM4	P49221	684 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	ZNF730	Q6ZMV8	503 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	RRM2B	Q7LG56	351 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	FAM216B	Q8N7L0	139 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	OR9Q1	Q8NGQ5	310 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	TSPEAR	Q8WU66	669 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	LRRC29	Q8WV35	223 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	C17orf50	Q8WW18	174 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	C12orf43	Q96C57	262 aa	Known RBP	15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	TPD52L3	Q96J77	140 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	C7orf26	Q96N11	449 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	SH3GL1	Q99961	368 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	B9D2	Q9BPU9	175 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	RHCG	Q9UBD6	479 aa		15.65	■□□□□ 0.1
CDK5RAP2-218	ENST00000491334	IMPA2	O14732	288 aa		15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	ACOT8	O14734	319 aa		15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	NDUFB2	O95178	105 aa		15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	NAA10	P41227	235 aa	Predicted RBP	15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	GPR4	P46093	362 aa		15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	GSK3B	P49841	420 aa		15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	ELF3	P78545	371 aa	Predicted RBP	15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	ZNF92	Q03936	586 aa		15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	CYLC2	Q14093	348 aa	Predicted RBP	15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	SLC36A3	Q495N2	470 aa		15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	CYBRD1	Q53TN4	286 aa		15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	ATPAF1	Q5TC12	328 aa	Predicted RBP	15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	NANOGP8	Q6NSW7	305 aa		15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	CFAP77	Q6ZQR2	320 aa		15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	MBOAT2	Q6ZWT7	520 aa		15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334		Q8N2B8	174 aa		15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	NRIP3	Q9NQ35	241 aa		15.64	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334		A0A087WUU8	490 aa		15.63	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334		A0A1W2PQ09	198 aa		15.63	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334		E9PQ18	207 aa		15.63	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	DUS4L	O95620	317 aa	Known RBP	15.63	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	POU1F1	P28069	291 aa		15.63	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	CDKN2A	P42771	156 aa	Known RBP	15.63	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	YAP1	P46937	504 aa	Known RBP	15.63	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	SLC35A2	P78381	396 aa		15.63	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	SLC18B1	Q6NT16	456 aa		15.63	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	ERICH5	Q6P6B1	374 aa		15.63	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	TBPL2	Q6SJ96	375 aa		15.63	■□□□□ 0.09
CDK5RAP2-218	ENST00000491334	LINC00346	Q8IVM7	164 aa		15.63	■□□□□ 0.09

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms