RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 TMEM200AQ86VY9 491 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 PRSS35Q8N3Z0 413 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 ZFP41Q8N8Y5 198 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 SEMA6DQ8NFY4 1073 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 KBTBD8Q8NFY9 601 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 SLC25A40Q8TBP6 338 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 GHSRQ92847 366 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 FBXW5Q969U6 566 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 MUL1Q969V5 352 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 FAM71F1Q96KD3 344 aaPredicted RBP9.44□□□□□ -0.9
VARS2-210ENST00000490699 OR2J1Q9GZK6 312 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 PLK3Q9H4B4 646 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 G6PC2Q9NQR9 355 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 GPR84Q9NQS5 396 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 CISD1Q9NZ45 108 aaKnown RBP9.44□□□□□ -0.9
VARS2-210ENST00000490699 DUSP13Q9UII6 198 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 ST6GALNAC2Q9UJ37 374 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 SLC22A13Q9Y226 551 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 STARD10Q9Y365 291 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 DOPEY1Q5JWR5 2465 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 SPTBN1Q01082 2364 aaKnown RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 HEATR1Q9H583 2144 aaKnown RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 LOC390937A0A1W2PQ73 354 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 OR4C45A6NMZ5 311 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 DHRS7CA6NNS2 312 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 E9PI62 339 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 DHRS3O75911 302 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 INMTO95050 263 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 ZFPL1O95159 310 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 NGFP01138 241 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 TTRP02766 147 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 ERCC1P07992 297 aaPredicted RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 SMIM18P0DKX4 95 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 JUNBP17275 347 aaPredicted RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 GABRA5P31644 462 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 APOBEC3AP31941 199 aaPredicted RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 LIPAP38571 399 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 KIR3DL2P43630 455 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 RPL5P46777 297 aaKnown RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 NANOS3P60323 173 aaKnown RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 SNRPD2P62316 118 aaKnown RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 HGFACQ04756 655 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 MZT1Q08AG7 82 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 RIPPLY1Q0D2K3 151 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 TPBGQ13641 420 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 GK2Q14410 553 aaPredicted RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 NKPD1Q17RQ9 610 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 RSPO1Q2MKA7 263 aaPredicted RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 ZNF672Q499Z4 452 aaPredicted RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 MBNL2Q5VZF2 373 aaKnown RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 FBXW12Q6X9E4 464 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 NAA40Q86UY6 237 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 ZNF485Q8NCK3 441 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 OR2AE1Q8NHA4 323 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 KLF14Q8TD94 323 aaPredicted RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 SPSB4Q96A44 273 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 C10orf35Q96D05 121 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 CMBLQ96DG6 245 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 OPALINQ96PE5 141 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 DHRS9Q9BPW9 319 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 PDCD1LG2Q9BQ51 273 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 TMED9Q9BVK6 235 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 SLC22A4Q9H015 551 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 SLITRK2Q9H156 845 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 ABCB9Q9NP78 766 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 CYSLTR2Q9NS75 346 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 NKIRAS2Q9NYR9 191 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 PLEKHB1Q9UF11 243 aaPredicted RBP9.43□□□□□ -0.9
VARS2-210ENST00000490699 ENPP5Q9UJA9 477 aa9.43□□□□□ -0.9
VARS2-210ENST00000490699 ANKHD1Q8IWZ3 2542 aaKnown RBP9.42□□□□□ -0.9
VARS2-210ENST00000490699 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.42□□□□□ -0.9
VARS2-210ENST00000490699 TRIM64CA6NLI5 447 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 ANXA2P2A6NMY6 339 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 SHISA9B4DS77 424 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 ZNF879B4DU55 563 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 GATBO75879 557 aaKnown RBP9.42□□□□□ -0.9
VARS2-210ENST00000490699 ARL6IP5O75915 188 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 RGS9O75916 674 aaPredicted RBP9.42□□□□□ -0.9
VARS2-210ENST00000490699 OR4A8P0C604 315 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 TNFSF4P23510 183 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 SSTR2P30874 369 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 THBS4P35443 961 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 SERPINF1P36955 418 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 GSK3AP49840 483 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 PPP3R1P63098 170 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 NKX6-1P78426 367 aaPredicted RBP9.42□□□□□ -0.9
VARS2-210ENST00000490699 ZNF92Q03936 586 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 Q499Y3 187 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 ZBTB37Q5TC79 503 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 AGAP6Q5VW22 663 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 XAF1Q6GPH4 301 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 PRSS45Q7RTY3 260 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 PHC2Q8IXK0 858 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 ACBD4Q8NC06 268 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 MRPL24Q96A35 216 aaKnown RBP9.42□□□□□ -0.9
VARS2-210ENST00000490699 SGK3Q96BR1 496 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 CPNE2Q96FN4 548 aaPredicted RBP9.42□□□□□ -0.9
VARS2-210ENST00000490699 MARS2Q96GW9 593 aaKnown RBP9.42□□□□□ -0.9
VARS2-210ENST00000490699 TECTBQ96PL2 329 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 HIST1H2AAQ96QV6 131 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms