RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	REPIN1	Q9BWE0	567 aa	Known RBP	15.72	■□□□□ 0.11
C4A-256	ENST00000490663	EGLN1	Q9GZT9	426 aa		15.72	■□□□□ 0.11
C4A-256	ENST00000490663	CLN6	Q9NWW5	311 aa		15.72	■□□□□ 0.11
C4A-256	ENST00000490663	WARS2	Q9UGM6	360 aa	Known RBP	15.72	■□□□□ 0.11
C4A-256	ENST00000490663	GTF2A1L	Q9UNN4	478 aa		15.72	■□□□□ 0.11
C4A-256	ENST00000490663	LOC100130705	A0A1B0GUX0	176 aa		15.71	■□□□□ 0.11
C4A-256	ENST00000490663	ZNF670-ZNF695	F2Z2N8	137 aa		15.71	■□□□□ 0.11
C4A-256	ENST00000490663	XRCC2	O43543	280 aa		15.71	■□□□□ 0.11
C4A-256	ENST00000490663	CD55	P08174	381 aa		15.71	■□□□□ 0.11
C4A-256	ENST00000490663	TNFSF4	P23510	183 aa		15.71	■□□□□ 0.11
C4A-256	ENST00000490663	HOXA4	Q00056	320 aa	Predicted RBP	15.71	■□□□□ 0.11
C4A-256	ENST00000490663	PRAMEF6	Q5VXH4	476 aa		15.71	■□□□□ 0.11
C4A-256	ENST00000490663	KCTD18	Q6PI47	426 aa	Predicted RBP	15.71	■□□□□ 0.11
C4A-256	ENST00000490663	OR13G1	Q8NGZ3	307 aa		15.71	■□□□□ 0.11
C4A-256	ENST00000490663	MEGF10	Q96KG7	1140 aa		15.71	■□□□□ 0.11
C4A-256	ENST00000490663	LYZL4	Q96KX0	146 aa		15.71	■□□□□ 0.11
C4A-256	ENST00000490663	ADAT1	Q9BUB4	502 aa	Known RBP	15.71	■□□□□ 0.11
C4A-256	ENST00000490663	OR10A2	Q9H208	303 aa		15.71	■□□□□ 0.11
C4A-256	ENST00000490663	TMEM100	Q9NV29	134 aa		15.71	■□□□□ 0.11
C4A-256	ENST00000490663	SMPD3	Q9NY59	655 aa	Predicted RBP	15.71	■□□□□ 0.11
C4A-256	ENST00000490663	hCG_38984	A0A1B0GV85	526 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663	PNP	P00491	289 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663	GABRB1	P18505	474 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663	SNRPG	P62308	76 aa	Known RBP	15.7	■□□□□ 0.1
C4A-256	ENST00000490663	FAM3A	P98173	230 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663	HFE	Q30201	348 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663	CLDND2	Q8NHS1	167 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663	CYGB	Q8WWM9	190 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663	RNFT2	Q96EX2	444 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663	DIRC2	Q96SL1	478 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663	AMBN	Q9NP70	447 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663	YAE1D1	Q9NRH1	226 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663	FAM206A	Q9NX38	181 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663	HAO2	Q9NYQ3	351 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663	MRM2	Q9UI43	246 aa	Known RBP	15.7	■□□□□ 0.1
C4A-256	ENST00000490663	TMEM14A	Q9Y6G1	99 aa		15.7	■□□□□ 0.1
C4A-256	ENST00000490663		A0A1W2PQL4	384 aa	Predicted RBP	15.69	■□□□□ 0.1
C4A-256	ENST00000490663	CLDN25	C9JDP6	229 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	INAFM1	C9JVW0	142 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663		H3BSH0	61 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	RPP14	O95059	124 aa	Known RBP	15.69	■□□□□ 0.1
C4A-256	ENST00000490663	ZNF205	O95201	554 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	APOC1	P02654	83 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	TACSTD2	P09758	323 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	ATP6V1E1	P36543	226 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	RIDA	P52758	137 aa	Known RBP	15.69	■□□□□ 0.1
C4A-256	ENST00000490663	MRPS11	P82912	194 aa	Known RBP	15.69	■□□□□ 0.1
C4A-256	ENST00000490663	OR8G1	Q15617	311 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	MOGAT3	Q86VF5	341 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	ZNF679	Q8IYX0	411 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	ASB17	Q8WXJ9	295 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	SPSB4	Q96A44	273 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	MRO	Q9BYG7	248 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	UFSP2	Q9NUQ7	469 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	IL19	Q9UHD0	177 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	WIPI2	Q9Y4P8	454 aa		15.69	■□□□□ 0.1
C4A-256	ENST00000490663	TMEM269	A0A1B0GVZ9	245 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	ISPD	A4D126	451 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	CD5L	O43866	347 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	SRSF10	O75494	262 aa	Known RBP	15.68	■□□□□ 0.1
C4A-256	ENST00000490663	CYB5R3	P00387	301 aa	Predicted RBP	15.68	■□□□□ 0.1
C4A-256	ENST00000490663	ACKR3	P25106	362 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	GSK3A	P49840	483 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	MMP16	P51512	607 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	CHN2	P52757	468 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	ROM1	Q03395	351 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	ZNF85	Q03923	595 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	ZNF91	Q05481	1191 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	MAB21L1	Q13394	359 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	OCLN	Q16625	522 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	TP53I3	Q53FA7	332 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	OGFRL1	Q5TC84	451 aa	Predicted RBP	15.68	■□□□□ 0.1
C4A-256	ENST00000490663	RHOU	Q7L0Q8	258 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	YIPF7	Q8N8F6	280 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	ZNF540	Q8NDQ6	660 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	ZNF555	Q8NEP9	628 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	OR52H1	Q8NGJ2	320 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	APH1B	Q8WW43	257 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	TRUB1	Q8WWH5	349 aa	Known RBP	15.68	■□□□□ 0.1
C4A-256	ENST00000490663	RFK	Q969G6	155 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	PBOV1	Q9GZY1	135 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	PPP1R3C	Q9UQK1	317 aa		15.68	■□□□□ 0.1
C4A-256	ENST00000490663	ANK3	Q12955	4377 aa	Known RBP	15.68	■□□□□ 0.1
C4A-256	ENST00000490663	PSMB10	P40306	273 aa		15.67	■□□□□ 0.1
C4A-256	ENST00000490663	MTNR1A	P48039	350 aa		15.67	■□□□□ 0.1
C4A-256	ENST00000490663	IL5RA	Q01344	420 aa		15.67	■□□□□ 0.1
C4A-256	ENST00000490663	POU4F2	Q12837	409 aa		15.67	■□□□□ 0.1
C4A-256	ENST00000490663	MPPED2	Q15777	294 aa		15.67	■□□□□ 0.1
C4A-256	ENST00000490663	SMN1	Q16637	294 aa	Known RBP	15.67	■□□□□ 0.1
C4A-256	ENST00000490663	ODF4	Q2M2E3	257 aa		15.67	■□□□□ 0.1
C4A-256	ENST00000490663	FAM201A	Q5SY85	155 aa		15.67	■□□□□ 0.1
C4A-256	ENST00000490663	COMMD2	Q86X83	199 aa		15.67	■□□□□ 0.1
C4A-256	ENST00000490663	CNIH3	Q8TBE1	160 aa		15.67	■□□□□ 0.1
C4A-256	ENST00000490663	MSI2	Q96DH6	328 aa	Known RBP	15.67	■□□□□ 0.1
C4A-256	ENST00000490663	FAM71F1	Q96KD3	344 aa	Predicted RBP	15.67	■□□□□ 0.1
C4A-256	ENST00000490663	NIPAL2	Q9H841	368 aa		15.67	■□□□□ 0.1
C4A-256	ENST00000490663	SP140L	Q9H930	580 aa		15.67	■□□□□ 0.1
C4A-256	ENST00000490663	LPAR2	Q9HBW0	351 aa		15.67	■□□□□ 0.1
C4A-256	ENST00000490663	GCM1	Q9NP62	436 aa		15.67	■□□□□ 0.1
C4A-256	ENST00000490663	TMEM106B	Q9NUM4	274 aa		15.67	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms