RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 FAM206AQ9NX38 181 aa13.62□□□□□ -0.23
PCCB-218ENST00000490504 V9GYH0 126 aa13.62□□□□□ -0.23
PCCB-218ENST00000490504 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.61□□□□□ -0.23
PCCB-218ENST00000490504 ZNF724A8MTY0 619 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 RER1O15258 196 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 ISG15P05161 165 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 CD99P14209 185 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 ACHEP22303 614 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 APEX1P27695 318 aaKnown RBP13.61□□□□□ -0.23
PCCB-218ENST00000490504 PSMA6P60900 246 aaKnown RBP13.61□□□□□ -0.23
PCCB-218ENST00000490504 GRB2P62993 217 aaKnown RBP13.61□□□□□ -0.23
PCCB-218ENST00000490504 RGS21Q2M5E4 152 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 TMEM244Q5VVB8 128 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.61□□□□□ -0.23
PCCB-218ENST00000490504 SYT9Q86SS6 491 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 GJC3Q8NFK1 279 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 PPP1R14AQ96A00 147 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 TMEM106AQ96A25 262 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 S100PBPQ96BU1 408 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 ORAI1Q96D31 301 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 CCDC32Q9BV29 185 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 OR10A4Q9H209 315 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 UBTD1Q9HAC8 227 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 CRLF2Q9HC73 371 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 PRSS50Q9UI38 385 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 AK6Q9Y3D8 172 aaKnown RBP13.61□□□□□ -0.23
PCCB-218ENST00000490504 TBX1O43435 398 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 TMEM127O75204 238 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 MRPL33O75394 65 aaKnown RBP13.61□□□□□ -0.23
PCCB-218ENST00000490504 OR3A2P47893 321 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 HIST1H3AP68431 136 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 IFITM3Q01628 133 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 BEX5Q5H9J7 111 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 SFRP5Q5T4F7 317 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 HIST2H3PS2Q5TEC6 136 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 FAM27BQ5VT28 67 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 ALKBH2Q6NS38 261 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 FAM131AQ6UXB0 335 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 HIST2H3AQ71DI3 136 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 SNX29P2Q8IUI4 249 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 STEAP2Q8NFT2 490 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 ZNF837Q96EG3 531 aaPredicted RBP13.61□□□□□ -0.23
PCCB-218ENST00000490504 ALKBH3Q96Q83 286 aaPredicted RBP13.61□□□□□ -0.23
PCCB-218ENST00000490504 LINC00470Q9BZP3 86 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 SLCO5A1Q9H2Y9 848 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 GPR35Q9HC97 309 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 ABCB10Q9NRK6 738 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 DDX28Q9NUL7 540 aaKnown RBP13.61□□□□□ -0.23
PCCB-218ENST00000490504 TMEM38BQ9NVV0 291 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 ABRACLQ9P1F3 81 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 HHLA2Q9UM44 414 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 DHDHQ9UQ10 334 aa13.61□□□□□ -0.23
PCCB-218ENST00000490504 A0A1B0GVG6 124 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 LOC107986453A0A1B0GWG9 222 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 FABP12A6NFH5 140 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 OR6C65A6NJZ3 312 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 H3BSH0 61 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 CD2P06729 351 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 SLC2A2P11168 524 aaPredicted RBP13.6□□□□□ -0.23
PCCB-218ENST00000490504 ATF1P18846 271 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 CNIH2Q6PI25 160 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 METAP1DQ6UB28 335 aaPredicted RBP13.6□□□□□ -0.23
PCCB-218ENST00000490504 LINGO2Q7L985 606 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 LRRTM1Q86UE6 522 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 ELMOD2Q8IZ81 293 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 LRRC18Q8N456 261 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 TRMT10AQ8TBZ6 339 aaKnown RBP13.6□□□□□ -0.23
PCCB-218ENST00000490504 PLPPR2Q96GM1 343 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 GFI1Q99684 422 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 PBOV1Q9GZY1 135 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 BEX4Q9NWD9 120 aaPredicted RBP13.6□□□□□ -0.23
PCCB-218ENST00000490504 NUFIP1Q9UHK0 495 aaKnown RBP13.6□□□□□ -0.23
PCCB-218ENST00000490504 ZFHX3Q15911 3703 aa13.6□□□□□ -0.23
PCCB-218ENST00000490504 ISPDA4D126 451 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 AIPO00170 330 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 PLAUP00749 431 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 CST2P09228 141 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 IL32P24001 234 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 EVX1P49640 407 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 P2RY6Q15077 328 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 STK11Q15831 433 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 ZNF79Q15937 498 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 CEACAM16Q2WEN9 425 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 ZNF433Q8N7K0 673 aaPredicted RBP13.59□□□□□ -0.23
PCCB-218ENST00000490504 WFDC11Q8NEX6 87 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 CHPT1Q8WUD6 406 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 SDHCQ99643 169 aaPredicted RBP13.59□□□□□ -0.23
PCCB-218ENST00000490504 BRD7Q9NPI1 651 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 V9GY05 133 aa13.59□□□□□ -0.23
PCCB-218ENST00000490504 MED13LQ71F56 2210 aa13.58□□□□□ -0.24
PCCB-218ENST00000490504 TRAV8-7A0A075B6U6 113 aa13.58□□□□□ -0.24
PCCB-218ENST00000490504 FAM25AB3EWG3 89 aa13.58□□□□□ -0.24
PCCB-218ENST00000490504 FAM25CB3EWG5 89 aa13.58□□□□□ -0.24
PCCB-218ENST00000490504 FAM25GB3EWG6 89 aa13.58□□□□□ -0.24
PCCB-218ENST00000490504 P2RY10O00398 339 aa13.58□□□□□ -0.24
PCCB-218ENST00000490504 KRT33AO76009 404 aa13.58□□□□□ -0.24
PCCB-218ENST00000490504 PTBP1P26599 531 aaKnown RBP eCLIP13.58□□□□□ -0.242e-7■■■■□ 25.3
PCCB-218ENST00000490504 HOXC12P31275 282 aa13.58□□□□□ -0.24
PCCB-218ENST00000490504 CX3CR1P49238 355 aa13.58□□□□□ -0.24
PCCB-218ENST00000490504 PSMD7P51665 324 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms