RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TMEM5Q9Y2B1 443 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 ANKRD61A6NGH8 418 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 FAM220BPB1ANY3 271 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 J3KTA2 159 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 DCTN6O00399 190 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 LCATP04180 440 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 IFNW1P05000 195 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 MUC1P15941 1255 aaPredicted RBP6.7□□□□□ -1.34
USP39-216ENST00000490193 EEF1B2P24534 225 aaKnown RBP6.7□□□□□ -1.34
USP39-216ENST00000490193 OTX1P32242 354 aaPredicted RBP6.7□□□□□ -1.34
USP39-216ENST00000490193 SAA4P35542 130 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 MDH1P40925 334 aaKnown RBP6.7□□□□□ -1.34
USP39-216ENST00000490193 CDKN2AP42771 156 aaKnown RBP6.7□□□□□ -1.34
USP39-216ENST00000490193 FXYD6P3P58550 94 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 TRAP1Q12931 704 aaKnown RBP6.7□□□□□ -1.34
USP39-216ENST00000490193 MEP1BQ16820 701 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 OXLD1Q5BKU9 147 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 SLC18B1Q6NT16 456 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 CRIP3Q6Q6R5 217 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 CORO6Q6QEF8 472 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 TBPL2Q6SJ96 375 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 ZNF730Q6ZMV8 503 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 CFAP77Q6ZQR2 320 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 C1orf122Q6ZSJ8 110 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 MRPL21Q7Z2W9 205 aaKnown RBP6.7□□□□□ -1.34
USP39-216ENST00000490193 TSEN54Q7Z6J9 526 aaKnown RBP6.7□□□□□ -1.34
USP39-216ENST00000490193 NAA40Q86UY6 237 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 CMTM4Q8IZR5 234 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 BOLLQ8N9W6 283 aaKnown RBP6.7□□□□□ -1.34
USP39-216ENST00000490193 BEND2Q8NDZ0 799 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 LZICQ8WZA0 190 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 ST8SIA4Q92187 359 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 TPD52L3Q96J77 140 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 PPA2Q9H2U2 334 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 RERGLQ9H628 205 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 RNPEPL1Q9HAU8 725 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 SIRT7Q9NRC8 400 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 AURKAIP1Q9NWT8 199 aaPredicted RBP6.7□□□□□ -1.34
USP39-216ENST00000490193 C1orf123Q9NWV4 160 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 ONECUT1Q9UBC0 465 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 RHCGQ9UBD6 479 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 CYB5R1Q9UHQ9 305 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 PRPF19Q9UMS4 504 aaKnown RBP6.7□□□□□ -1.34
USP39-216ENST00000490193 MAB21L2Q9Y586 359 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 SNX13Q9Y5W8 968 aa6.7□□□□□ -1.34
USP39-216ENST00000490193 BIRC6Q9NR09 4857 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 A0A1B0GW55 424 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 F5H5K5 113 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.69□□□□□ -1.34
USP39-216ENST00000490193 M0R135 149 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 SOCS2O14508 198 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 PAHP00439 452 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 DUX4L2P0CJ85 424 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 DUX4L3P0CJ86 424 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 DUX4L4P0CJ87 422 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 DUX4L5P0CJ88 424 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 DUX4L6P0CJ89 424 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 DUX4L7P0CJ90 424 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 GGT2P36268 569 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 YAP1P46937 504 aaKnown RBP6.69□□□□□ -1.34
USP39-216ENST00000490193 RPS6KA3P51812 740 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 UBE2E1P51965 193 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 TPTEP56180 551 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 ZNF92Q03936 586 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 MZT1Q08AG7 82 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 DBPQ10586 325 aaPredicted RBP6.69□□□□□ -1.34
USP39-216ENST00000490193 AANATQ16613 207 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 PCK2Q16822 640 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 SLC36A3Q495N2 470 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 WDR38Q5JTN6 314 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 ATPAF1Q5TC12 328 aaPredicted RBP6.69□□□□□ -1.34
USP39-216ENST00000490193 METTL21CQ5VZV1 264 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 DUX4L9Q6RFH8 374 aaPredicted RBP6.69□□□□□ -1.34
USP39-216ENST00000490193 DPY19L2P2Q6ZN68 376 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 ZNF826PQ6ZT77 177 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 SLC36A1Q7Z2H8 476 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 VTCN1Q7Z7D3 282 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 ZBTB46Q86UZ6 589 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 OR6V1Q8N148 313 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 FGFRL1Q8N441 504 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 KLHDC1Q8N7A1 406 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 DTX3Q8N9I9 347 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 OR4S1Q8NGB4 309 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 OR4C13Q8NGP0 309 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 OR2T6Q8NHC8 308 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 PPP1R35Q8TAP8 253 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 SLC7A13Q8TCU3 470 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 PHF21AQ96BD5 680 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 C12orf43Q96C57 262 aaKnown RBP6.69□□□□□ -1.34
USP39-216ENST00000490193 ZNF799Q96GE5 643 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 TSSK2Q96PF2 358 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 PITX2Q99697 317 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 DCTN5Q9BTE1 182 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 OPA3Q9H6K4 179 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 RAB18Q9NP72 206 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 C14orf119Q9NWQ9 140 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 DUX4Q9UBX2 424 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 B9D1Q9UPM9 204 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 FOXJ3Q9UPW0 622 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms