RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 FAM3AP98173 230 aa14.87□□□□□ -0.03
ERCC3-207ENST00000490062 MRPL28Q13084 256 aaKnown RBP14.87□□□□□ -0.03
ERCC3-207ENST00000490062 OR8B8Q15620 311 aa14.87□□□□□ -0.03
ERCC3-207ENST00000490062 SPNS3Q6ZMD2 512 aa14.87□□□□□ -0.03
ERCC3-207ENST00000490062 MRPL21Q7Z2W9 205 aaKnown RBP14.87□□□□□ -0.03
ERCC3-207ENST00000490062 GGHQ92820 318 aa14.87□□□□□ -0.03
ERCC3-207ENST00000490062 SIGLEC11Q96RL6 698 aa14.87□□□□□ -0.03
ERCC3-207ENST00000490062 SLC30A2Q9BRI3 323 aa14.87□□□□□ -0.03
ERCC3-207ENST00000490062 SNX5Q9Y5X3 404 aa14.87□□□□□ -0.03
ERCC3-207ENST00000490062 ZSCAN5BA6NJL1 495 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 CD300LBA8K4G0 201 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 LOC110117498-PIK3R3F6TDL0 507 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 MAGEB4O15481 346 aaPredicted RBP14.86□□□□□ -0.03
ERCC3-207ENST00000490062 NDUFS7O75251 213 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 TTRP02766 147 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 LIMS3P0CW19 117 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 LIMS4P0CW20 117 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 ZNF81P51508 661 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 MFGE8Q08431 387 aaPredicted RBP14.86□□□□□ -0.03
ERCC3-207ENST00000490062 SNCBQ16143 134 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 TIGD6Q17RP2 521 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 RNLSQ5VYX0 342 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 OR2T2Q6IF00 324 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 Q6ZR03 302 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 FAM220AQ7Z4H9 259 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 ELMOD2Q8IZ81 293 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 YIPF7Q8N8F6 280 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 PLPP7Q8NBV4 271 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 OR2AE1Q8NHA4 323 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 RORBQ92753 470 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 PERPQ96FX8 193 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 REEP6Q96HR9 211 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 ALG8Q9BVK2 526 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 TTTY10Q9BZA0 68 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 PBOV1Q9GZY1 135 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 SLC22A4Q9H015 551 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 MRPL15Q9P015 296 aaKnown RBP14.86□□□□□ -0.03
ERCC3-207ENST00000490062 EXOSC1Q9Y3B2 195 aaKnown RBP14.86□□□□□ -0.03
ERCC3-207ENST00000490062 CREBBPQ92793 2442 aa14.86□□□□□ -0.03
ERCC3-207ENST00000490062 TBX1O43435 398 aa14.85□□□□□ -0.03
ERCC3-207ENST00000490062 DENRO43583 198 aaKnown RBP14.85□□□□□ -0.03
ERCC3-207ENST00000490062 IGHV1-46P01743 117 aa14.85□□□□□ -0.03
ERCC3-207ENST00000490062 CSF3P09919 207 aa14.85□□□□□ -0.03
ERCC3-207ENST00000490062 CCL1P22362 96 aa14.85□□□□□ -0.03
ERCC3-207ENST00000490062 CCR9P51686 369 aa14.85□□□□□ -0.03
ERCC3-207ENST00000490062 TNK1Q13470 666 aa14.85□□□□□ -0.03
ERCC3-207ENST00000490062 CATSPERDQ86XM0 798 aa14.85□□□□□ -0.03
ERCC3-207ENST00000490062 PELI1Q96FA3 418 aa14.85□□□□□ -0.03
ERCC3-207ENST00000490062 TMEM80Q96HE8 168 aa14.85□□□□□ -0.03
ERCC3-207ENST00000490062 LYZL4Q96KX0 146 aa14.85□□□□□ -0.03
ERCC3-207ENST00000490062 VRK1Q99986 396 aaPredicted RBP14.85□□□□□ -0.03
ERCC3-207ENST00000490062 ACOXLQ9NUZ1 547 aa14.85□□□□□ -0.03
ERCC3-207ENST00000490062 OR52A1Q9UKL2 312 aa14.85□□□□□ -0.03
ERCC3-207ENST00000490062 CAB39Q9Y376 341 aaPredicted RBP14.85□□□□□ -0.03
ERCC3-207ENST00000490062 NOP16Q9Y3C1 178 aaKnown RBP14.85□□□□□ -0.03
ERCC3-207ENST00000490062 OTOGQ6ZRI0 2925 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 DHRS7CA6NNS2 312 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 SLC1A7O00341 560 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 XPNPEP2O43895 674 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 NAT2P11245 290 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 OR12D2P58182 307 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 DSCR9P59020 149 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 ST3GAL4Q11206 333 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 MED21Q13503 144 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 TP53I3Q53FA7 332 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 LHFPL3Q86UP9 236 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 KLBQ86Z14 1044 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 ZCCHC24Q8N2G6 241 aaKnown RBP14.84□□□□□ -0.03
ERCC3-207ENST00000490062 CCDC54Q8NEL0 328 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 CSNK2A3Q8NEV1 391 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 OR13G1Q8NGZ3 307 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 RHNO1Q9BSD3 238 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 Q9H521 79 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 BRD7Q9NPI1 651 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 GNG8Q9UK08 70 aa14.84□□□□□ -0.03
ERCC3-207ENST00000490062 TGM4P49221 684 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 GSK3AP49840 483 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 SLC35A2P78381 396 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 Q5PR19 223 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 ZBTB37Q5TC79 503 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 ZNF786Q8N393 782 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 CELF2-AS1Q8N7Q2 184 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 ZNF485Q8NCK3 441 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 BPIFB6Q8NFQ5 453 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 OR56B2PQ8NGI1 322 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 OR2G2Q8NGZ5 317 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 OR52N1Q8NH53 320 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 RPS4Y2Q8TD47 263 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 GTF3AQ92664 365 aaKnown RBP14.83□□□□□ -0.04
ERCC3-207ENST00000490062 C4orf36Q96KX1 117 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 DUSP21Q9H596 190 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 MSL2Q9HCI7 577 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 TMEM100Q9NV29 134 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 IL19Q9UHD0 177 aa14.83□□□□□ -0.04
ERCC3-207ENST00000490062 A0A1B0GTI1 187 aa14.82□□□□□ -0.04
ERCC3-207ENST00000490062 GGT3PA6NGU5 568 aa14.82□□□□□ -0.04
ERCC3-207ENST00000490062 NDUFS8O00217 210 aa14.82□□□□□ -0.04
ERCC3-207ENST00000490062 GMDSO60547 372 aa14.82□□□□□ -0.04
ERCC3-207ENST00000490062 LILRA1O75019 489 aa14.82□□□□□ -0.04
ERCC3-207ENST00000490062 NCR1O76036 304 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms