RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 TNFAIP6P98066 277 aaPredicted RBP5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 CD47Q08722 323 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 ST3GAL3Q11203 375 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 ZMYND11Q15326 602 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 RSPO1Q2MKA7 263 aaPredicted RBP5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 CYBRD1Q53TN4 286 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 MORN5Q5VZ52 161 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 ERICH5Q6P6B1 374 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 FAM122BQ7Z309 247 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 TSEN54Q7Z6J9 526 aaKnown RBP5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 ZER1Q7Z7L7 766 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 RNF113BQ8IZP6 322 aaKnown RBP5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 SPICQ8N5J4 248 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 SIGLECL1Q8N7X8 197 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 ST7LQ8TDW4 575 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 LRTOMTQ8WZ04 291 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 PTP4A1Q93096 173 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 CMBLQ96DG6 245 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 THOC1Q96FV9 657 aaKnown RBP5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 RITA1Q96K30 269 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 PRRC1Q96M27 445 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 GPA33Q99795 319 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 ECSITQ9BQ95 431 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 SIKE1Q9BRV8 207 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 C1QTNF5Q9BXJ0 243 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 QTRT1Q9BXR0 403 aaKnown RBP5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 TMEM165Q9HC07 324 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 DDX28Q9NUL7 540 aaKnown RBP5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 INTS9Q9NV88 658 aaKnown RBP5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 UBAP1Q9NZ09 502 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 PPIAL4AQ9Y536 164 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 SNX13Q9Y5W8 968 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 AUP1Q9Y679 476 aa5.31□□□□□ -1.56
PRPF40A-210ENST00000489741 PRKDCP78527 4128 aaKnown RBP5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 TRAV27A0A087WT01 109 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 A0A087WUU8 490 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 ISPDA4D126 451 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 OR6C6A6NF89 314 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 CEACAM18A8MTB9 384 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 C12orf71A8MTZ7 269 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 IFNL4K9M1U5 179 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 CDC42EP2O14613 210 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 TIMM8AO60220 97 aaPredicted RBP5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 CD14P08571 375 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 IFI30P13284 250 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 MDH2P40926 338 aaKnown RBP5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 PMELP40967 661 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 GUCA1AP43080 201 aaPredicted RBP5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 SLC9A3P48764 834 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 ERFP50548 548 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 LSM6P62312 80 aaKnown RBP5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 HIST1H3AP68431 136 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 SLC9A3R2Q15599 337 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 ZNF181Q2M3W8 571 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 CCDC92Q53HC0 331 aaPredicted RBP5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 HIST2H3PS2Q5TEC6 136 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 LEG1Q6P5S2 330 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 TBPL2Q6SJ96 375 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 ARL9Q6T311 187 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 FBXW12Q6X9E4 464 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 COLCA1Q6ZS62 124 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 TMPRSS11FQ6ZWK6 438 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 HIST2H3AQ71DI3 136 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 ZNF771Q7L3S4 317 aaPredicted RBP5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 KCTD20Q7Z5Y7 419 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 OAFQ86UD1 273 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 IGFN1Q86VF2 1251 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 NRMQ8IXM6 262 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 OFCC1Q8IZS5 231 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 GALNT4Q8N4A0 578 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 PCYOX1LQ8NBM8 494 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 NPEPL1Q8NDH3 523 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 OR2Z1Q8NG97 314 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 OR51A7Q8NH64 312 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 SCARB1Q8WTV0 552 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 ITLN1Q8WWA0 313 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 ACOT11Q8WXI4 607 aaPredicted RBP5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 UPRTQ96BW1 309 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 SLITRK2Q9H156 845 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 SAR1AQ9NR31 198 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 ATPIF1Q9UII2 106 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 PPP1R3CQ9UQK1 317 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 LRCH1Q9Y2L9 728 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 MMP24Q9Y5R2 645 aa5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 SOX21Q9Y651 276 aaPredicted RBP5.3□□□□□ -1.56
PRPF40A-210ENST00000489741 A0A0G2JND7 137 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 TEX13CA0A0J9YWL9 993 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 LOC100653049A0A140TA62 436 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 KIR2DS1A0A191URI9 304 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 PRSS37A4D1T9 235 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 BBIP1A8MTZ0 92 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 FAM220BPB1ANY3 271 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 HMGB1P1B2RPK0 211 aaPredicted RBP5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 J3KTA2 159 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 RAB27BO00194 218 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 MRASO14807 208 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 SURF4O15260 269 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 SGCEO43556 437 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 RRP9O43818 475 aaKnown RBP5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 KRT34O76011 436 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms