RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 MLNRO43193 412 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 HLA-DPB1P04440 258 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 ANOS1P23352 680 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 PSMA6P60900 246 aaKnown RBP14.66□□□□□ -0.06
MDC1-206ENST00000489540 SNRPGP62308 76 aaKnown RBP14.66□□□□□ -0.06
MDC1-206ENST00000489540 FAM3AP98173 230 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 AVPI1Q5T686 147 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 KLBQ86Z14 1044 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 LINC01356Q8N9X3 169 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 SPERTQ8NA61 448 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 OR51G2Q8NGK0 314 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 GCM1Q9NP62 436 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 ZNF391Q9UJN7 358 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 COPS3Q9UNS2 423 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 ANKRD30BLA7E2S9 258 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 F5H5P2 479 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 TGFAP01135 160 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 OR2T7P0C7T2 308 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 HOXB4P17483 251 aaPredicted RBP14.66□□□□□ -0.06
MDC1-206ENST00000489540 CA6P23280 308 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 IL2RGP31785 369 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 ATP6V1E1P36543 226 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 RIDAP52758 137 aaKnown RBP14.66□□□□□ -0.06
MDC1-206ENST00000489540 EGR3Q06889 387 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 OR8G1Q15617 311 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 SNCBQ16143 134 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 MEDAGQ5VYS4 303 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 FAM166AQ6J272 317 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 ZNF322Q6U7Q0 402 aaPredicted RBP14.66□□□□□ -0.06
MDC1-206ENST00000489540 OR56B2PQ8NGI1 322 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 OR2T27Q8NH04 317 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 UBE2FQ969M7 185 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 ERGIC1Q969X5 290 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 MBOAT4Q96T53 435 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 NARFLQ9H6Q4 476 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 TMEM160Q9NX00 188 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 ZNF319Q9P2F9 582 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 IKZF2Q9UKS7 526 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.66□□□□□ -0.06
MDC1-206ENST00000489540 GMPPBQ9Y5P6 360 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 NPTNQ9Y639 398 aa14.66□□□□□ -0.06
MDC1-206ENST00000489540 CR1P17927 2039 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 TMEM269A0A1B0GVZ9 245 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 SNTNA6NMZ2 147 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 B4DSR2 109 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 PSMD9O00233 223 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 WNT9BO14905 357 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 LMX1BO60663 402 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 CD200P41217 278 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 GATA4P43694 442 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 GSK3AP49840 483 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 CDH15P55291 814 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 CXCR4P61073 352 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 LMO4P61968 165 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 MZT1Q08AG7 82 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 OCLNQ16625 522 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 ZNF829Q3KNS6 432 aaPredicted RBP14.65□□□□□ -0.06
MDC1-206ENST00000489540 PLPP7Q8NBV4 271 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 CSNK2A3Q8NEV1 391 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 ITFG2Q969R8 447 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 C8orf4Q9NR00 106 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 KCNS2Q9ULS6 477 aa14.65□□□□□ -0.06
MDC1-206ENST00000489540 SETD2Q9BYW2 2564 aaPredicted RBP14.65□□□□□ -0.06
MDC1-206ENST00000489540 ZFHX3Q15911 3703 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.64□□□□□ -0.07
MDC1-206ENST00000489540 hCG_38984A0A1B0GV85 526 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 LRRC30A6NM36 301 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 MPZL2O60487 215 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 CRLF1O75462 422 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 ANPEPP15144 967 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 ZNF16P17020 682 aaPredicted RBP14.64□□□□□ -0.07
MDC1-206ENST00000489540 MMP16P51512 607 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 MAB21L1Q13394 359 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 ZNF181Q2M3W8 571 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 GFOD2Q3B7J2 385 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 FTMTQ8N4E7 242 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 RAB39BQ96DA2 213 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 RDH12Q96NR8 316 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 SOX7Q9BT81 388 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 ZNF665Q9H7R5 613 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 FAM206AQ9NX38 181 aa14.64□□□□□ -0.07
MDC1-206ENST00000489540 A0A0U1RQV5 110 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 LOC100130705A0A1B0GUX0 176 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 PRR32B1ATL7 298 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 TMEM178BH3BS89 294 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 ENTPD6O75354 484 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 MTNR1AP48039 350 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 RCN1Q15293 331 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 C1orf87Q8N0U7 546 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 OR8B12Q8NGG6 310 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 GAL3ST1Q99999 423 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 APOL4Q9BPW4 351 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 ADAT1Q9BUB4 502 aaKnown RBP14.63□□□□□ -0.07
MDC1-206ENST00000489540 FAM118AQ9NWS6 357 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 DCAF16Q9NXF7 216 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 ZANQ9Y493 2812 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 C2CD3Q4AC94 2353 aa14.63□□□□□ -0.07
MDC1-206ENST00000489540 FN1P02751 2386 aaKnown RBP14.62□□□□□ -0.07
MDC1-206ENST00000489540 A0A1W2PQL4 384 aaPredicted RBP14.62□□□□□ -0.07
MDC1-206ENST00000489540 ISPDA4D126 451 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms