RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 SLC5A6Q9Y289 635 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 POLR1DQ9Y2S0 133 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 NPTNQ9Y639 398 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 MRPS18BQ9Y676 258 aaKnown RBP7.47□□□□□ -1.21
VTI1A-207ENST00000489357 LHFPL6Q9Y693 200 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 PCNX3Q9H6A9 2034 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 A0A1B0GVC2 190 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 OR2M5A3KFT3 312 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 A6NIN4 97 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF891A8MT65 544 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-207ENST00000489357 NKX2-8O15522 239 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 DOK2O60496 412 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 MPZL1O95297 269 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 QDPRP09417 244 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 SULT1A3P0DMM9 295 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 SULT1A4P0DMN0 295 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 RAB3AP20336 220 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 C4BPBP20851 252 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 MPZP25189 248 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 OTX1P32242 354 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-207ENST00000489357 RCVRNP35243 200 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF84P51523 738 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 CLDN12P56749 244 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 GALK2Q01415 458 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 MADCAM1Q13477 382 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 ARL6IP1Q15041 203 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 TAF13Q15543 124 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 LINC00303Q3SY05 128 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 GLYATL3Q5SZD4 288 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 PDSS1Q5T2R2 415 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 PRAMEF20Q5VT98 475 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 RAET1LQ5VY80 246 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 ASPHD2Q6ICH7 369 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF767PQ75MW2 155 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 PRSS45Q7RTY3 260 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 TMEM123Q8N131 208 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 SPICQ8N5J4 248 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 TMEM229BQ8NBD8 167 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 DNAAF1Q8NEP3 725 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 OR10S1Q8NGN2 331 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 OR6N1Q8NGY5 312 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 GPX8Q8TED1 209 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 CAPSLQ8WWF8 208 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 GIMAP1Q8WWP7 306 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 ORAI1Q96D31 301 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 CPNE2Q96FN4 548 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-207ENST00000489357 MEGF10Q96KG7 1140 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 FYTTD1Q96QD9 318 aaKnown RBP7.46□□□□□ -1.22
VTI1A-207ENST00000489357 SLC25A21Q9BQT8 299 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-207ENST00000489357 TP63Q9H3D4 680 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-207ENST00000489357 CENPMQ9NSP4 180 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 TAS2R4Q9NYW5 299 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 KLK11Q9UBX7 282 aa7.46□□□□□ -1.22
VTI1A-207ENST00000489357 BOKQ9UMX3 212 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-207ENST00000489357 RP1L1Q8IWN7 2480 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-207ENST00000489357 TRAV6A0A075B6T7 132 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 MEIKINA0A087WXM9 373 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 IGKV1D-43A0A0B4J1Z2 117 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 TMEM272A0A1B0GTI8 110 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 OR6C65A6NJZ3 312 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 CREBL2O60519 120 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-207ENST00000489357 MTRF1O75570 445 aaKnown RBP7.45□□□□□ -1.22
VTI1A-207ENST00000489357 IGLV3-1P01715 115 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 MT-ND4P03905 459 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 CHRM2P08172 466 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF20P17024 532 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 CNR1P21554 472 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 SFTPDP35247 375 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 CASRP41180 1078 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 ALDH3B1P43353 468 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 MAGEB1P43366 347 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 CYB561P49447 251 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 CLDN17P56750 224 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 IFITM2Q01629 132 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 CAMK2DQ13557 499 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 MEF2DQ14814 521 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 PCGF3Q3KNV8 242 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 ACER2Q5QJU3 275 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 FAM27BQ5VT28 67 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 SEZ6L2Q6UXD5 910 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 GLDNQ6ZMI3 551 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-207ENST00000489357 CFAP77Q6ZQR2 320 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 LINC00346Q8IVM7 164 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 C20orf196Q8IYI0 205 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 CLEC1AQ8NC01 280 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 OR1M1Q8NGA1 313 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 OR9K2Q8NGE7 335 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 OR52H1Q8NGJ2 320 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 CCDC107Q8WV48 283 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 PP6455Q8WZ26 134 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 CPNE4Q96A23 557 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-207ENST00000489357 EMC6Q9BV81 110 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 SSBP4Q9BWG4 385 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-207ENST00000489357 ATG5Q9H1Y0 275 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 SEC61A2Q9H9S3 476 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 NOX3Q9HBY0 568 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 PNRC2Q9NPJ4 139 aaKnown RBP7.45□□□□□ -1.22
VTI1A-207ENST00000489357 PAQR5Q9NXK6 330 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-207ENST00000489357 SLC2A8Q9NY64 477 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 ASH2LQ9UBL3 628 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms