RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 MROQ9BYG7 248 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 UBAP1Q9NZ09 502 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 MRPL15Q9P015 296 aaKnown RBP12.07□□□□□ -0.48
BRCA1-218ENST00000489037 TMEFF2Q9UIK5 374 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-218ENST00000489037 FAM157AC9JC47 383 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 PHYHO14832 338 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 MLNRO43193 412 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 MRPL3P09001 348 aaKnown RBP12.06□□□□□ -0.48
BRCA1-218ENST00000489037 FAM157CP0CG43 387 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 SRD5A1P18405 259 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 ALOX5APP20292 161 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 CA6P23280 308 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 FAM120AOSQ5T036 256 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 DEGS2Q6QHC5 323 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 KLBQ86Z14 1044 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 MUC20Q8N307 709 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-218ENST00000489037 FTMTQ8N4E7 242 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 ASB17Q8WXJ9 295 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 TMEM186Q96B77 213 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 REEP6Q96HR9 211 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 IL4I1Q96RQ9 567 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 AMELYQ99218 206 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 CNN2Q99439 309 aaKnown RBP12.06□□□□□ -0.48
BRCA1-218ENST00000489037 MNTQ99583 582 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 ADAT1Q9BUB4 502 aaKnown RBP12.06□□□□□ -0.48
BRCA1-218ENST00000489037 RGCCQ9H4X1 137 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 LPAR2Q9HBW0 351 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 GCM1Q9NP62 436 aa12.06□□□□□ -0.48
BRCA1-218ENST00000489037 TRAV20A0A0B4J274 112 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 CCDC182A6NF36 153 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 TMEM178BH3BS89 294 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 IGHV2-5P01817 119 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 EPHA2P29317 976 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 SRP14P37108 136 aaKnown RBP12.05□□□□□ -0.48
BRCA1-218ENST00000489037 CD200P41217 278 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 MMP16P51512 607 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 CDC42P60953 191 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 BTG1P62324 171 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 GFOD2Q3B7J2 385 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 TMEM155Q4W5P6 130 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 LRRN1Q6UXK5 716 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 MOGAT3Q86VF5 341 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 CSNK2A3Q8NEV1 391 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 OR56B2PQ8NGI1 322 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 ZNF420Q8TAQ5 688 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-218ENST00000489037 SPSB4Q96A44 273 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 SGK3Q96BR1 496 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 GABARAPL3Q9BY60 117 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 FN3KRPQ9HA64 309 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 C14orf119Q9NWQ9 140 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 HIF1ANQ9NWT6 349 aa12.05□□□□□ -0.48
BRCA1-218ENST00000489037 IGHV3-64DA0A0J9YX35 117 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 A0A1B0GWJ7 208 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 ACOD1A6NK06 481 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 ZNF670-ZNF695F2Z2N8 137 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 H3BNX3 289 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 M0R129 80 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 ZNF254O75437 659 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 IGHV2-70P01814 119 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 GNALP38405 381 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 MDH2P40926 338 aaKnown RBP12.04□□□□□ -0.48
BRCA1-218ENST00000489037 GATA4P43694 442 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 RIDAP52758 137 aaKnown RBP12.04□□□□□ -0.48
BRCA1-218ENST00000489037 HCCSP53701 268 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 PSMA6P60900 246 aaKnown RBP12.04□□□□□ -0.48
BRCA1-218ENST00000489037 FAM3AP98173 230 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 ZNF181Q2M3W8 571 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 AADACL4Q5VUY2 407 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 ZNF771Q7L3S4 317 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-218ENST00000489037 LRRC28Q86X40 367 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-218ENST00000489037 TEX29Q8N6K0 151 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 OR8J1Q8NGP2 316 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 OR8S1Q8NH09 359 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 STMN2Q93045 179 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 RFKQ969G6 155 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 C9orf16Q9BUW7 83 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 S100A14Q9HCY8 104 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 IMPAD1Q9NX62 359 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 DCAF16Q9NXF7 216 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 WARS2Q9UGM6 360 aaKnown RBP12.04□□□□□ -0.48
BRCA1-218ENST00000489037 ZNF391Q9UJN7 358 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 IKZF2Q9UKS7 526 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 LRP12Q9Y561 859 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 ARHGAP32A7KAX9 2087 aa12.04□□□□□ -0.48
BRCA1-218ENST00000489037 ANK3Q12955 4377 aaKnown RBP12.03□□□□□ -0.48
BRCA1-218ENST00000489037 C5orf63A6NC05 138 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 PLPP2O43688 288 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 FOXH1O75593 365 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 CYB5R3P00387 301 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-218ENST00000489037 ATP6V1E1P36543 226 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 POLR2IP36954 125 aaKnown RBP12.03□□□□□ -0.48
BRCA1-218ENST00000489037 GSK3AP49840 483 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 ALDH3A2P51648 485 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 EFNB1P98172 346 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 POU4F2Q12837 409 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 MAB21L1Q13394 359 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 ZNF829Q3KNS6 432 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-218ENST00000489037 FAHD2BQ6P2I3 314 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-218ENST00000489037 IL17RELQ6ZVW7 336 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 PRSS45Q7RTY3 260 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms