RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 CANT1Q8WVQ1 401 aa9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 RAB40AQ8WXH6 277 aa9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 ERGIC1Q969X5 290 aa9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 DUX5Q96PT3 197 aa9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 OR8B2Q96RD0 313 aa9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 ADAT1Q9BUB4 502 aaKnown RBP9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 SLC22A4Q9H015 551 aa9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 C1orf21Q9H246 121 aa9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 FN3KRPQ9HA64 309 aa9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 NTN4Q9HB63 628 aa9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 CMC2Q9NRP2 79 aa9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 NOP16Q9Y3C1 178 aaKnown RBP9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 SOX21Q9Y651 276 aaPredicted RBP9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 TANC2Q9HCD6 1990 aa9.97□□□□□ -0.81
CCHCR1-215ENST00000488920 IGHV2-70DA0A0C4DH43 119 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 ZNF878C9JN71 531 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 GNGT2O14610 69 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 TBX1O43435 398 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 ANXA2P07355 339 aaKnown RBP9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 IGHV4-38-2P0DP08 117 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 GRK5P34947 590 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 SLC15A1P46059 708 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 CX3CR1P49238 355 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 UBA52P62987 128 aaKnown RBP9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 SFRP4Q6FHJ7 346 aaPredicted RBP9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 BTNL3Q6UXE8 466 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 LRRN1Q6UXK5 716 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 DCDC5Q6ZRR9 648 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 DPY19L4Q7Z388 723 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 ERI1Q8IV48 349 aaKnown RBP9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 C3orf56Q8N813 242 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 OR56B2PQ8NGI1 322 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 OR6N2Q8NGY6 317 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 SGK3Q96BR1 496 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 INTS14Q96SY0 518 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 ABHD6Q9BV23 337 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 OR51V1Q9H2C8 321 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 C1orf123Q9NWV4 160 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 MRPL15Q9P015 296 aaKnown RBP9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 PDP1Q9P0J1 537 aaPredicted RBP9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 RNF7Q9UBF6 113 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 WNK2Q9Y3S1 2297 aa9.96□□□□□ -0.82
CCHCR1-215ENST00000488920 KIR2DS1A0A191URI9 304 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 C3orf80F5H4A9 247 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 PRKACGP22612 351 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 HSD11B1P28845 292 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 COMPP49747 757 aaPredicted RBP9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 GRB2P62993 217 aaKnown RBP9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 GINS1Q14691 196 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 WDR25Q64LD2 544 aaPredicted RBP9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 ZNF841Q6ZN19 808 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 ZNF826PQ6ZT77 177 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 FAM57BQ71RH2 274 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 DOK3Q7L591 496 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 HS3ST5Q8IZT8 346 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 SPSB4Q96A44 273 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 DACT3Q96B18 629 aaPredicted RBP9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 ZMYND19Q96E35 227 aaPredicted RBP9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 ZNF48Q96MX3 618 aaPredicted RBP9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 AMELYQ99218 206 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 NUDT16L1Q9BRJ7 211 aaKnown RBP9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 MS4A7Q9GZW8 240 aaPredicted RBP9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 MMADHCQ9H3L0 296 aaPredicted RBP9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 BRD7Q9NPI1 651 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 DNAJC27Q9NZQ0 273 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 CLN8Q9UBY8 286 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 NBEAL1Q6ZS30 2694 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 TENM1Q9UKZ4 2725 aa9.95□□□□□ -0.82
CCHCR1-215ENST00000488920 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 ARRDC5A6NEK1 342 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 A6NLC8 198 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 AQP12BA6NM10 295 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 ANKRD30BLA7E2S9 258 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 LGALS8O00214 317 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 GYG2O15488 501 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 XRCC2O43543 280 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 E2F6O75461 281 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 GLCEO94923 617 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 PTBP3O95758 552 aaKnown RBP9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 PAICSP22234 425 aaKnown RBP9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 PSMB10P40306 273 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 ZNF121P58317 390 aaPredicted RBP9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 FAM3AP98173 230 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 POU4F2Q12837 409 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 BAMBIQ13145 260 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 GK3PQ14409 553 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 OR8B8Q15620 311 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 TIGD6Q17RP2 521 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 TUSC1Q2TAM9 212 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 PLBD1Q6P4A8 553 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 SLC16A9Q7RTY1 509 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 PRSS45Q7RTY3 260 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 TRPM8Q7Z2W7 1104 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 SPATA24Q86W54 205 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 AQP12AQ8IXF9 295 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 TIGD4Q8IY51 512 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 PARP8Q8N3A8 854 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 SPERTQ8NA61 448 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 PLPP7Q8NBV4 271 aa9.94□□□□□ -0.82
CCHCR1-215ENST00000488920 RNF133Q8WVZ7 376 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms