RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 A0A1W2PPZ6 126 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 TUBAL3A6NHL2 446 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 ACOD1A6NK06 481 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 AIPO00170 330 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 CTDSPLO15194 276 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 B4GALT1P15291 398 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 MMP15P51511 669 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 OR7E24Q6IFN5 339 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 DPY19L4Q7Z388 723 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 SYT9Q86SS6 491 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 HSD17B8Q92506 261 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 ABHD1Q96SE0 405 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 OR10A4Q9H209 315 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 BRD7Q9NPI1 651 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 TMEM38BQ9NVV0 291 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 PTPN13Q12923 2485 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 A0A1W2PR80 420 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 OR5H1A6NKK0 313 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 TMEM212A6NML5 194 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 OR4C45A6NMZ5 311 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 SLC16A7O60669 478 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 ZNF254O75437 659 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 RPP14O95059 124 aaKnown RBP16.86■□□□□ 0.29
CCM2-216ENST00000488727 THBDP07204 575 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 PSKH1P11801 424 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 COL8A1P27658 744 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 CDAP32320 146 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 GPR176Q14439 515 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 TBRG1Q3YBR2 411 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 ANKRD16Q6P6B7 361 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 KLHL24Q6TFL4 600 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 OR2G2Q8NGZ5 317 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 THRSPQ92748 146 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 FAM210AQ96ND0 272 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 OR8B4Q96RC9 309 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 IKZF2Q9UKS7 526 aa16.86■□□□□ 0.29
CCM2-216ENST00000488727 IFITM5A6NNB3 132 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 GSTZ1O43708 216 aaPredicted RBP16.85■□□□□ 0.29
CCM2-216ENST00000488727 LANCL1O43813 399 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 RAF1P04049 648 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 SLC6A1P30531 599 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 ZNF84P51523 738 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 MEX3BQ6ZN04 569 aaKnown RBP16.85■□□□□ 0.29
CCM2-216ENST00000488727 ZNF813Q6ZN06 617 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 C17orf78Q8N4C9 275 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 WDR31Q8NA23 367 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 LGALS14Q8TCE9 139 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 CREB3L1Q96BA8 519 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 FOXN4Q96NZ1 517 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 NEK6Q9HC98 313 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 SLC17A5Q9NRA2 495 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 CRIM1Q9NZV1 1036 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 NLKQ9UBE8 527 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 POU2F3Q9UKI9 436 aa16.85■□□□□ 0.29
CCM2-216ENST00000488727 TRBV5-7A0A0A0MS05 114 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 ZNF503-AS2A6NEH8 195 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 ORC5O43913 435 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 ATP6V1G1O75348 118 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 TIMM23BQ5SRD1 257 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 SP5Q6BEB4 398 aaPredicted RBP16.84■□□□□ 0.29
CCM2-216ENST00000488727 SEZ6L2Q6UXD5 910 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 FOXL2NBQ6ZUU3 175 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 OR52N5Q8NH56 324 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 ZNF671Q8TAW3 534 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 YIPF5Q969M3 257 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 NABP1Q96AH0 204 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 UPRTQ96BW1 309 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 C4orf45Q96LM5 186 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 COMMD4Q9H0A8 199 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 SLITRK2Q9H156 845 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 NDRG3Q9UGV2 375 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 KCNG2Q9UJ96 466 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 COA3Q9Y2R0 106 aaPredicted RBP16.84■□□□□ 0.29
CCM2-216ENST00000488727 V9GY05 133 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 PKDREJQ9NTG1 2253 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 A0A0B4J203 849 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 PPP3CBP16298 524 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 CRABP1P29762 137 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 CCR9P51686 369 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 BTG1P62324 171 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 MRPS34P82930 218 aaKnown RBP16.84■□□□□ 0.29
CCM2-216ENST00000488727 ROM1Q03395 351 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 TATDN3Q17R31 274 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 PLA1AQ53H76 456 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 SLC22A24Q8N4F4 322 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 THEM6Q8WUY1 208 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 ZNF486Q96H40 463 aaPredicted RBP16.84■□□□□ 0.29
CCM2-216ENST00000488727 SPOCK3Q9BQ16 436 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 C7orf50Q9BRJ6 194 aaKnown RBP16.84■□□□□ 0.29
CCM2-216ENST00000488727 MRPL22Q9NWU5 206 aaKnown RBP16.84■□□□□ 0.29
CCM2-216ENST00000488727 SLCO1C1Q9NYB5 712 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 ZNF224Q9NZL3 707 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 CACNG2Q9Y698 323 aa16.84■□□□□ 0.29
CCM2-216ENST00000488727 A0A1W2PPL8 197 aa16.83■□□□□ 0.28
CCM2-216ENST00000488727 ZNF593O00488 134 aaPredicted RBP16.83■□□□□ 0.28
CCM2-216ENST00000488727 KHDRBS3O75525 346 aaKnown RBP16.83■□□□□ 0.28
CCM2-216ENST00000488727 GPANK1O95872 356 aa16.83■□□□□ 0.28
CCM2-216ENST00000488727 CALCBP10092 127 aa16.83■□□□□ 0.28
CCM2-216ENST00000488727 SLC18B1Q6NT16 456 aa16.83■□□□□ 0.28
CCM2-216ENST00000488727 GLCCI1Q86VQ1 547 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms