RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 RGS18Q9NS28 235 aa1.76□□□□□ -2.13
CD46-215ENST00000488596 MRPL22Q9NWU5 206 aaKnown RBP1.76□□□□□ -2.13
CD46-215ENST00000488596 MARCOQ9UEW3 520 aaPredicted RBP1.76□□□□□ -2.13
CD46-215ENST00000488596 YARS2Q9Y2Z4 477 aaKnown RBP1.76□□□□□ -2.13
CD46-215ENST00000488596 WIF1Q9Y5W5 379 aa1.76□□□□□ -2.13
CD46-215ENST00000488596 COL1A2P08123 1366 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.75□□□□□ -2.13
CD46-215ENST00000488596 TTC41PQ6P2S7 1318 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 IGHV3-72A0A0B4J1Y9 119 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 TMEM120BA0PK00 339 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 LRRIQ4A6NIV6 560 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 PDZK1P1A8MUH7 402 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 A8MUU9 505 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 ANKRD65E5RJM6 399 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 TNFRSF11BO00300 401 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 ZBTB5O15062 677 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 SIVA1O15304 175 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 AKR7A2O43488 359 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 EIF1BO60739 113 aaKnown RBP1.75□□□□□ -2.13
CD46-215ENST00000488596 TDP2O95551 362 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 DCNP07585 359 aaKnown RBP1.75□□□□□ -2.13
CD46-215ENST00000488596 IL1RNP18510 177 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 CELP19835 753 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 TUBG1P23258 451 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 MYCNOSP40205 109 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 EIF1P41567 113 aaKnown RBP1.75□□□□□ -2.13
CD46-215ENST00000488596 RAD51Q06609 339 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 PNOCQ13519 176 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 ZNF829Q3KNS6 432 aaPredicted RBP1.75□□□□□ -2.13
CD46-215ENST00000488596 ZNF547Q8IVP9 402 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 LRRC75AQ8NAA5 344 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 OR10W1Q8NGF6 305 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 OR1J4Q8NGS1 313 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 OR10G6Q8NH81 332 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 APH1AQ96BI3 265 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 BTN2A3PQ96KV6 586 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 JSRP1Q96MG2 331 aaPredicted RBP1.75□□□□□ -2.13
CD46-215ENST00000488596 RTBDNQ9BSG5 229 aaPredicted RBP1.75□□□□□ -2.13
CD46-215ENST00000488596 CALN1Q9BXU9 219 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 C1orf198Q9H425 327 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 ZNF442Q9H7R0 627 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 EXOSC4Q9NPD3 245 aaKnown RBP1.75□□□□□ -2.13
CD46-215ENST00000488596 TUBG2Q9NRH3 451 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 RABL2AQ9UBK7 228 aaPredicted RBP1.75□□□□□ -2.13
CD46-215ENST00000488596 DDX19BQ9UMR2 479 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 FARSAQ9Y285 508 aaKnown RBP1.75□□□□□ -2.13
CD46-215ENST00000488596 SIGLEC9Q9Y336 463 aa1.75□□□□□ -2.13
CD46-215ENST00000488596 CAB39Q9Y376 341 aaPredicted RBP1.75□□□□□ -2.13
CD46-215ENST00000488596 IGKV1D-17A0A075B6S4 117 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 IGHV3OR16-9A0A0B4J2B5 98 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 IGHV7-4-1A0A0J9YVY3 117 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 NCF1BA6NI72 391 aaPredicted RBP1.74□□□□□ -2.13
CD46-215ENST00000488596 NCF1CA8MVU1 366 aaPredicted RBP1.74□□□□□ -2.13
CD46-215ENST00000488596 LGALS9O00182 355 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 POLR1CO15160 346 aaPredicted RBP1.74□□□□□ -2.13
CD46-215ENST00000488596 ERI3O43414 337 aaKnown RBP1.74□□□□□ -2.13
CD46-215ENST00000488596 CDRT1O95170 752 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 SCELO95171 688 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 TGM6O95932 706 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 PAHP00439 452 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 IGKV1-17P01599 117 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 ASGR1P07306 291 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 MYL9P24844 172 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 PFN2P35080 140 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 PPICP45877 212 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 GPR1P46091 355 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 SIGLEC14Q08ET2 396 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 RPEL1Q2QD12 228 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 YIF1BQ5BJH7 314 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 BEX5Q5H9J7 111 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 OPN5Q6U736 354 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 WDR82Q6UXN9 313 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 UNQ9165/PRO28630Q6UXU0 137 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 MDP1Q86V88 176 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 UNC93AQ86WB7 457 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 MYOCDQ8IZQ8 938 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 KIF2BQ8N4N8 673 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 COMMD1Q8N668 190 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 LRRC52Q8N7C0 313 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 OR5T1Q8NG75 326 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 OR9A2Q8NGT5 310 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 C17orf50Q8WW18 174 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 RTN4IP1Q8WWV3 396 aaPredicted RBP1.74□□□□□ -2.13
CD46-215ENST00000488596 PEX13Q92968 403 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 RERGQ96A58 199 aaPredicted RBP1.74□□□□□ -2.13
CD46-215ENST00000488596 OPALINQ96PE5 141 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 CTRCQ99895 268 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 ANP32EQ9BTT0 268 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 IQCGQ9H095 443 aaKnown RBP1.74□□□□□ -2.13
CD46-215ENST00000488596 C8orf33Q9H7E9 229 aaPredicted RBP1.74□□□□□ -2.13
CD46-215ENST00000488596 DDX18Q9NVP1 670 aaKnown RBP1.74□□□□□ -2.13
CD46-215ENST00000488596 RHBDL2Q9NX52 303 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 C21orf62Q9NYP8 219 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 SAR1BQ9Y6B6 198 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 S4R3C0 116 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 SCN4AP35499 1836 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 TICRRQ7Z2Z1 1910 aa1.74□□□□□ -2.13
CD46-215ENST00000488596 CENPVL3A0A0U1RRI6 287 aa1.73□□□□□ -2.13
CD46-215ENST00000488596 A0A1W2PRD5 423 aa1.73□□□□□ -2.13
CD46-215ENST00000488596 SLC16A7O60669 478 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms