RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 I3L521 148 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 SIX6O95475 246 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 PTH2RP49190 550 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 CLDN18P56856 261 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 PITPNAQ00169 270 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 LINC00303Q3SY05 128 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 ESCO2Q56NI9 601 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 LRRTM1Q86UE6 522 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 CCDC28AQ8IWP9 274 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 C20orf196Q8IYI0 205 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 ZADH2Q8N4Q0 377 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 GPR148Q8TDV2 347 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 ZNF436Q9C0F3 470 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-230ENST00000488543 RANBP3Q9H6Z4 567 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-230ENST00000488543 DKK4Q9UBT3 224 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 NCOA6Q14686 2063 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-230ENST00000488543 RGS11O94810 467 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 ALDOBP05062 364 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 TMEM69Q5SWH9 247 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 OR6N1Q8NGY5 312 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 TAAR6Q96RI8 345 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 C1orf198Q9H425 327 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 PNRC2Q9NPJ4 139 aaKnown RBP10.7□□□□□ -0.7
HDAC6-230ENST00000488543 CENPMQ9NSP4 180 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 B3GNT2Q9NY97 397 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 ZNF69Q9UC07 566 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 EMC9Q9Y3B6 208 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 RTTNQ86VV8 2226 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 H2BFMP0C1H6 154 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 MAPK3P27361 379 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-230ENST00000488543 TSPAN5P62079 268 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 GUCA2AQ02747 115 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 TBR1Q16650 682 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 ASPHD2Q6ICH7 369 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 STAC2Q6ZMT1 411 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 ZNF782Q6ZMW2 699 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-230ENST00000488543 COMMD7Q86VX2 200 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 RBMXL3Q8N7X1 1067 aaKnown RBP10.69□□□□□ -0.7
HDAC6-230ENST00000488543 OR4D10Q8NGI6 311 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 OR56B4Q8NH76 319 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 NABP1Q96AH0 204 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 LDAHQ9H6V9 325 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 MGAT4CQ9UBM8 478 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 OR52A1Q9UKL2 312 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 GTF2A1LQ9UNN4 478 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 FOXJ3Q9UPW0 622 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 RPS10-NUDT3A0A1W2PQS6 291 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 AIPO00170 330 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 CYTIPO60759 359 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 KRT33AO76009 404 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 NR2C1P13056 603 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 EFNB2P52799 333 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 C2orf68Q2NKX9 166 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 IGFL3Q6UXB1 125 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 UXS1Q8NBZ7 420 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 INTS12Q96CB8 462 aaKnown RBP10.69□□□□□ -0.7
HDAC6-230ENST00000488543 SORCS2Q96PQ0 1159 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 EXO5Q9H790 373 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 ZDHHC11Q9H8X9 412 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 ZNF71Q9NQZ8 489 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-230ENST00000488543 FAM206AQ9NX38 181 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 V9GY05 133 aa10.69□□□□□ -0.7
HDAC6-230ENST00000488543 TPRP12270 2363 aaKnown RBP10.69□□□□□ -0.7
HDAC6-230ENST00000488543 PDCD5O14737 125 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 DHHO43323 396 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 GSTZ1O43708 216 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-230ENST00000488543 ZNF708P17019 499 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 PSMB1P20618 241 aaKnown RBP10.68□□□□□ -0.7
HDAC6-230ENST00000488543 CXADRP78310 365 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 ENDOGQ14249 297 aaKnown RBP10.68□□□□□ -0.7
HDAC6-230ENST00000488543 GRK1Q15835 563 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 PLEKHN1Q494U1 663 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-230ENST00000488543 CPNE4Q96A23 557 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-230ENST00000488543 TMEM106AQ96A25 262 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 ZNF837Q96EG3 531 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-230ENST00000488543 ZNF416Q9BWM5 594 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 ACKR4Q9NPB9 350 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 SPRR3Q9UBC9 169 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 ASH2LQ9UBL3 628 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 POLR1DQ9Y2S0 133 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 TMEM269A0A1B0GVZ9 245 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 ACOT7O00154 380 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 PLA2G5P39877 138 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 MMP16P51512 607 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 LSM6P62312 80 aaKnown RBP10.68□□□□□ -0.7
HDAC6-230ENST00000488543 ZNF169Q14929 603 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-230ENST00000488543 PDSS1Q5T2R2 415 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 SFRP5Q5T4F7 317 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 BIVMQ86UB2 503 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 OR2AJ1Q8NGZ0 328 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 ABHD3Q8WU67 409 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 PNPLA2Q96AD5 504 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 NOX3Q9HBY0 568 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 TP53TG5Q9Y2B4 290 aa10.68□□□□□ -0.7
HDAC6-230ENST00000488543 TLN1Q9Y490 2541 aaKnown RBP10.68□□□□□ -0.7
HDAC6-230ENST00000488543 TRGV5A0A0B4J1U4 118 aa10.67□□□□□ -0.7
HDAC6-230ENST00000488543 MKRN2OSH3BPM6 223 aa10.67□□□□□ -0.7
HDAC6-230ENST00000488543 RER1O15258 196 aa10.67□□□□□ -0.7
HDAC6-230ENST00000488543 KDM4BO94953 1096 aa10.67□□□□□ -0.7
HDAC6-230ENST00000488543 ISG15P05161 165 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms