RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 ITLN1Q8WWA0 313 aa10.26□□□□□ -0.77
TTC3-221ENST00000488522 HAVCR1Q96D42 359 aa10.26□□□□□ -0.77
TTC3-221ENST00000488522 PLEKHA8Q96JA3 519 aa10.26□□□□□ -0.77
TTC3-221ENST00000488522 RDH12Q96NR8 316 aa10.26□□□□□ -0.77
TTC3-221ENST00000488522 NMNAT3Q96T66 252 aa10.26□□□□□ -0.77
TTC3-221ENST00000488522 CITED1Q99966 193 aa10.26□□□□□ -0.77
TTC3-221ENST00000488522 SSBP3Q9BWW4 388 aaPredicted RBP10.26□□□□□ -0.77
TTC3-221ENST00000488522 SYT4Q9H2B2 425 aa10.26□□□□□ -0.77
TTC3-221ENST00000488522 VCX3BQ9H321 246 aa10.26□□□□□ -0.77
TTC3-221ENST00000488522 POFUT1Q9H488 388 aa10.26□□□□□ -0.77
TTC3-221ENST00000488522 TOR3AQ9H497 397 aa10.26□□□□□ -0.77
TTC3-221ENST00000488522 GCM1Q9NP62 436 aa10.26□□□□□ -0.77
TTC3-221ENST00000488522 POLE4Q9NR33 117 aa10.26□□□□□ -0.77
TTC3-221ENST00000488522 SMPD3Q9NY59 655 aaPredicted RBP10.26□□□□□ -0.77
TTC3-221ENST00000488522 VSX1Q9NZR4 365 aaPredicted RBP10.26□□□□□ -0.77
TTC3-221ENST00000488522 ATPIF1Q9UII2 106 aa10.26□□□□□ -0.77
TTC3-221ENST00000488522 NDUFA7O95182 113 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 RAC2P15153 192 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 EPHA2P29317 976 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 POLR2IP36954 125 aaKnown RBP10.25□□□□□ -0.77
TTC3-221ENST00000488522 BPIFB3P59826 476 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 SCRN3Q0VDG4 424 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 CRMP1Q14194 572 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 SLX4IPQ5VYV7 408 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 BTNL3Q6UXE8 466 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 KLBQ86Z14 1044 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 TMEM86BQ8N661 226 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 CYB561A3Q8NBI2 242 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 SLC37A3Q8NCC5 494 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 RAB40AQ8WXH6 277 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 OR2V2Q96R30 315 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 MBOAT4Q96T53 435 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 FN3KQ9H479 309 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 RERGLQ9H628 205 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 TMEM165Q9HC07 324 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 RPRD1BQ9NQG5 326 aaKnown RBP10.25□□□□□ -0.77
TTC3-221ENST00000488522 CMC2Q9NRP2 79 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 TVP23BQ9NYZ1 205 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 MIOXQ9UGB7 285 aa10.25□□□□□ -0.77
TTC3-221ENST00000488522 TRAV40A0A0B4J280 105 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 KIR2DS1A0A191URI9 304 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 OR6C68A6NDL8 312 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 SRRM5B3KS81 715 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 SLC16A7O60669 478 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 SCG5P05408 212 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 CTLA4P16410 223 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 PAICSP22234 425 aaKnown RBP10.24□□□□□ -0.77
TTC3-221ENST00000488522 CRABP1P29762 137 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 RBMXP38159 391 aaKnown RBP10.24□□□□□ -0.77
TTC3-221ENST00000488522 GUCA1AP43080 201 aaPredicted RBP10.24□□□□□ -0.77
TTC3-221ENST00000488522 CDC42P60953 191 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 RPL15P61313 204 aaKnown RBP10.24□□□□□ -0.77
TTC3-221ENST00000488522 SNAPC1Q16533 368 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 C12orf73Q69YU5 71 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 FBXW12Q6X9E4 464 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 SPATC1Q76KD6 591 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 VASH1Q7L8A9 365 aaPredicted RBP10.24□□□□□ -0.77
TTC3-221ENST00000488522 ZNF555Q8NEP9 628 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 NRG4Q8WWG1 115 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 OTULINQ96BN8 352 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 CMBLQ96DG6 245 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 NEIL1Q96FI4 390 aaPredicted RBP10.24□□□□□ -0.77
TTC3-221ENST00000488522 NUAK2Q9H093 628 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 NOX4Q9NPH5 578 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 STARD10Q9Y365 291 aa10.24□□□□□ -0.77
TTC3-221ENST00000488522 A0A1W2PPL8 197 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 OR6C6A6NF89 314 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 PRR23D1E9PI22 279 aaPredicted RBP10.23□□□□□ -0.77
TTC3-221ENST00000488522 HOXA3O43365 443 aaPredicted RBP10.23□□□□□ -0.77
TTC3-221ENST00000488522 SGCEO43556 437 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 DOK2O60496 412 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 KHDRBS3O75525 346 aaKnown RBP10.23□□□□□ -0.77
TTC3-221ENST00000488522 PRR23D2P0DMB1 279 aaPredicted RBP10.23□□□□□ -0.77
TTC3-221ENST00000488522 RPS2P15880 293 aaKnown RBP10.23□□□□□ -0.77
TTC3-221ENST00000488522 HTR5AP47898 357 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 RGS6P49758 472 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 SLC25A1P53007 311 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 RELBQ01201 579 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 AQP6Q13520 282 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 ZNF404Q494X3 552 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 RHOUQ7L0Q8 258 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 PROKR2Q8NFJ6 384 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 OR9Q1Q8NGQ5 310 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 OR2T4Q8NH00 348 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 OR4F5Q8NH21 305 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 FAM81AQ8TBF8 368 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 TAF15Q92804 592 aaKnown RBP eCLIP10.23□□□□□ -0.77
TTC3-221ENST00000488522 PTP4A1Q93096 173 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 MEGF10Q96KG7 1140 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 HRASLS5Q96KN8 279 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 TSSK2Q96PF2 358 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 MMP27Q9H306 513 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 BEX1Q9HBH7 125 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 SRA1Q9HD15 236 aaKnown RBP10.23□□□□□ -0.77
TTC3-221ENST00000488522 IMPAD1Q9NX62 359 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 B9D1Q9UPM9 204 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 GMPPBQ9Y5P6 360 aa10.23□□□□□ -0.77
TTC3-221ENST00000488522 SOX21Q9Y651 276 aaPredicted RBP10.23□□□□□ -0.77
TTC3-221ENST00000488522 IGLV1-36A0A0B4J1U3 117 aa10.22□□□□□ -0.77
TTC3-221ENST00000488522 LOC100130705A0A1B0GUX0 176 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms