RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 TMEM86AQ8N2M4 240 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 OR2L13Q8N349 312 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 ANKFN1Q8N957 763 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 ZNF557Q8N988 423 aaPredicted RBP2.58□□□□□ -2
ITGB1-214ENST00000488427 OR4F15Q8NGB8 312 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 OR2G3Q8NGZ4 309 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 OR10G6Q8NH81 332 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 ZNF596Q8TC21 504 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 SLC22A8Q8TCC7 542 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 GIMAP1Q8WWP7 306 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 CXorf40BQ96DE9 158 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 PELI1Q96FA3 418 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 IFT74Q96LB3 600 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 KLF6Q99612 283 aaPredicted RBP2.58□□□□□ -2
ITGB1-214ENST00000488427 MRPL45Q9BRJ2 306 aaKnown RBP2.58□□□□□ -2
ITGB1-214ENST00000488427 SRMSQ9H3Y6 488 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 DYRK4Q9NR20 520 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 EXD2Q9NVH0 621 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 THUMPD1Q9NXG2 353 aaKnown RBP2.58□□□□□ -2
ITGB1-214ENST00000488427 RBAKQ9NYW8 714 aaPredicted RBP2.58□□□□□ -2
ITGB1-214ENST00000488427 TRAPPC4Q9Y296 219 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 AP1M2Q9Y6Q5 423 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 CSMD3Q7Z407 3707 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 NSG1A0A0A6YYJ2 146 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 TRAV17A0A0B4J275 112 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 BICDL2A1A5D9 508 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 PCP4L1A6NKN8 68 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 C3orf84H3BNL1 204 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 GOLGA8SH3BPF8 625 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 KPNA3O00505 521 aaPredicted RBP2.57□□□□□ -2
ITGB1-214ENST00000488427 HCRTO43612 131 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 PEX11AO75192 247 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 OXSR1O95747 527 aaPredicted RBP2.57□□□□□ -2
ITGB1-214ENST00000488427 TNFP01375 233 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 CLTAP09496 248 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 IGFBP3P17936 291 aaPredicted RBP2.57□□□□□ -2
ITGB1-214ENST00000488427 DRD5P21918 477 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 GNA11P29992 359 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 MLF1P58340 268 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 ARG2P78540 354 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 ENPEPQ07075 957 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 GRB7Q14451 532 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 OXA1LQ15070 435 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 PSG5Q15238 335 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 CLEC12BQ2HXU8 276 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 KLHL38Q2WGJ6 581 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 C10orf120Q5SQS8 335 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 C19orf35Q6ZS72 473 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 ZNF546Q86UE3 836 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 ZSCAN30Q86W11 494 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 LYPD1Q8N2G4 141 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 CATSPER1Q8NEC5 780 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 WFDC5Q8TCV5 224 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 UFD1Q92890 307 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 UBE2E3Q969T4 207 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 CMTM7Q96FZ5 175 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 RBM14Q96PK6 669 aaKnown RBP2.57□□□□□ -2
ITGB1-214ENST00000488427 RNF2Q99496 336 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 DEFB127Q9H1M4 99 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 UFSP2Q9NUQ7 469 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 SNX6Q9UNH7 406 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 MRPS33Q9Y291 106 aaKnown RBP2.57□□□□□ -2
ITGB1-214ENST00000488427 HEBP2Q9Y5Z4 205 aa2.57□□□□□ -2
ITGB1-214ENST00000488427 DYNC2H1Q8NCM8 4307 aaKnown RBP2.56□□□□□ -2
ITGB1-214ENST00000488427 SS18L1O75177 396 aaPredicted RBP2.56□□□□□ -2
ITGB1-214ENST00000488427 HMMRO75330 724 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 KRTAP5-8O75690 187 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 ATP5LO75964 103 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 CLDN9O95484 217 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 PSMA5P28066 241 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 SOX6P35712 828 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 ATP5J2P56134 94 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 TRDNQ13061 729 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 SLAQ13239 276 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 IMMTQ16891 758 aaKnown RBP2.56□□□□□ -2
ITGB1-214ENST00000488427 TMEM183BQ1AE95 376 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 DEFB116Q30KQ4 102 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 C1orf220Q5T0J3 134 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 PYHIN1Q6K0P9 492 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 TMEM183AQ8IXX5 376 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 ZNF561Q8N587 486 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 KIR2DL5BQ8NHK3 375 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 CD300LFQ8TDQ1 290 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 TMA16Q96EY4 203 aaKnown RBP2.56□□□□□ -2
ITGB1-214ENST00000488427 PDXPQ96GD0 296 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 CDC42EP4Q9H3Q1 356 aaKnown RBP2.56□□□□□ -2
ITGB1-214ENST00000488427 GIN1Q9NXP7 522 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 CDH9Q9ULB4 789 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 EXPH5Q8NEV8 1989 aa2.56□□□□□ -2
ITGB1-214ENST00000488427 SACSQ9NZJ4 4579 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 A0A0D9SFI3 127 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 TCRBV9S1A1TA0A576 114 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 FAM92AA1XBS5 289 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 LRCOL1A6NCL2 159 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 CCDC169A6NNP5 214 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 C12orf77C9JDV5 145 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 XPO1O14980 1071 aaKnown RBP2.55□□□□□ -2
ITGB1-214ENST00000488427 DIRAS1O95057 198 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 TDP2O95551 362 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 SMIM10L1P0DMW3 83 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms