RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 ZNF225Q9UK10 706 aa2.46□□□□□ -2.02
RBM28-207ENST00000488249 TP53TG3Q9ULZ0 132 aa2.46□□□□□ -2.02
RBM28-207ENST00000488249 UBQLN1Q9UMX0 589 aaKnown RBP2.46□□□□□ -2.02
RBM28-207ENST00000488249 SCML2Q9UQR0 700 aa2.46□□□□□ -2.02
RBM28-207ENST00000488249 ARHGEF10O15013 1369 aa2.46□□□□□ -2.02
RBM28-207ENST00000488249 MROH7Q68CQ1 1323 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 NRCAMQ92823 1304 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 ADAMTS9Q9P2N4 1935 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 TRGV8A0A0C4DH27 118 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 TCRBV9S1A1TA0A576 114 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 LRIT2A6NDA9 550 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 RFPL4AA6NLU0 287 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 EFCAB7A8K855 629 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 SEC14L6B5MCN3 397 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 RFPL4AL1F8VTS6 287 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 HSD17B6O14756 317 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 ALOX12BO75342 701 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 ANXA9O76027 345 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 OR7A10O76100 309 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 IGSF6O95976 241 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 BCHEP06276 602 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 HCKP08631 526 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 TACSTD2P09758 323 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 OR8U9P0C7N5 309 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 LIMS3P0CW19 117 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 LIMS4P0CW20 117 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 LIPCP11150 499 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 H2AFXP16104 143 aaPredicted RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 CSNK2A2P19784 350 aaPredicted RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 CELP19835 753 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 IGFBP5P24593 272 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 RPS12P25398 132 aaKnown RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 PSMA1P25786 263 aaKnown RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 GDF1P27539 372 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 ADORA1P30542 326 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 FGF9P31371 208 aaPredicted RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 PMELP40967 661 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 BTDP43251 543 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 XCR1P46094 333 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 SLCO1A2P46721 670 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 RPL5P46777 297 aaKnown RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 PPOXP50336 477 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 BACE1P56817 501 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 RPL31P62899 125 aaKnown RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 APOFQ13790 326 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 POU6F1Q14863 301 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 SPA17Q15506 151 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 ZIC1Q15915 447 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 MAPK14Q16539 360 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 C3AR1Q16581 482 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 DUSP7Q16829 419 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 EIPR1Q53HC9 387 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 C9orf66Q5T8R8 295 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 WDR25Q64LD2 544 aaPredicted RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 TMEM42Q69YG0 159 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 FAM199XQ6PEV8 388 aaPredicted RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 CASP12Q6UXS9 341 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 C4orf22Q6V702 233 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 CYHR1Q6ZMK1 362 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 SH2D6Q7Z4S9 175 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 FAM19A1Q7Z5A9 133 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 HSD11B1LQ7Z5J1 315 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 CMC1Q7Z7K0 106 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 MRPL52Q86TS9 123 aaKnown RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 THOC6Q86W42 341 aaKnown RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 FBXO16Q8IX29 292 aaPredicted RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 BLIDQ8IZY5 108 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 ZNF561Q8N587 486 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 UBL4BQ8N7F7 174 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 TMEM161BQ8NDZ6 487 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 OR5B3Q8NH48 314 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 OR5K2Q8NHB8 316 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 LHFPL5Q8TAF8 219 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 AENQ8WTP8 325 aaKnown RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 TESCQ96BS2 214 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 SMIM19Q96E16 107 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 RAB3CQ96E17 227 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 CAPNS2Q96L46 248 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 KCTD7Q96MP8 289 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 ALKBH3Q96Q83 286 aaPredicted RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 PHB2Q99623 299 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 TMEM208Q9BTX3 173 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 UGT2B28Q9BY64 529 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 YTHDF1Q9BYJ9 559 aaKnown RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 RAB34Q9BZG1 259 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 ZSCAN16Q9H4T2 348 aaPredicted RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 NHEJ1Q9H9Q4 299 aaPredicted RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 S100A14Q9HCY8 104 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 C6orf50Q9HD87 102 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 NRN1Q9NPD7 142 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 MCUBQ9NWR8 336 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 PRODH2Q9UF12 536 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 MGAT4AQ9UM21 535 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 SAMD4AQ9UPU9 718 aaKnown RBP2.45□□□□□ -2.02
RBM28-207ENST00000488249 OR51B4Q9Y5P0 310 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 NUBP2Q9Y5Y2 271 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 SYNJ2O15056 1496 aa2.45□□□□□ -2.02
RBM28-207ENST00000488249 SMIM28A0A1B0GU29 152 aa2.44□□□□□ -2.02
RBM28-207ENST00000488249 A0A1B0GV90 55 aa2.44□□□□□ -2.02
RBM28-207ENST00000488249 TINCRA0A1B0GVN0 87 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms