RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 FAM71F1Q96KD3 344 aaPredicted RBP12.07□□□□□ -0.48
NUP188-207ENST00000487952 MRPL37Q9BZE1 423 aaKnown RBP12.07□□□□□ -0.48
NUP188-207ENST00000487952 ACOT13Q9NPJ3 140 aa12.07□□□□□ -0.48
NUP188-207ENST00000487952 GPR84Q9NQS5 396 aa12.07□□□□□ -0.48
NUP188-207ENST00000487952 FRRS1LQ9P0K9 344 aa12.07□□□□□ -0.48
NUP188-207ENST00000487952 PLCE1Q9P212 2302 aa12.07□□□□□ -0.48
NUP188-207ENST00000487952 ZNF319Q9P2F9 582 aa12.07□□□□□ -0.48
NUP188-207ENST00000487952 PURGQ9UJV8 347 aaKnown RBP12.07□□□□□ -0.48
NUP188-207ENST00000487952 PNMA8CA0A1B0GUJ8 204 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 TRIM64A6NGJ6 449 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 B9A039 149 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 SYT7O43581 403 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 CLPTM1O96005 669 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 LALBAP00709 142 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 ATP6V1B1P15313 513 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 ANOS1P23352 680 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 NANOS3P60323 173 aaKnown RBP12.06□□□□□ -0.48
NUP188-207ENST00000487952 SNRPD2P62316 118 aaKnown RBP12.06□□□□□ -0.48
NUP188-207ENST00000487952 EMX1Q04741 257 aaPredicted RBP12.06□□□□□ -0.48
NUP188-207ENST00000487952 SLC3A1Q07837 685 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 PSG7Q13046 419 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 OR2T2Q6IF00 324 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 DOK3Q7L591 496 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 ZNF485Q8NCK3 441 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 UFD1Q92890 307 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 SPSB4Q96A44 273 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 HAVCR1Q96D42 359 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 SMIM19Q96E16 107 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 DYNLRB1Q9NP97 96 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 ISYNA1Q9NPH2 558 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 TAAR3PQ9P1P4 343 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 ST6GALNAC2Q9UJ37 374 aa12.06□□□□□ -0.48
NUP188-207ENST00000487952 LSM2Q9Y333 95 aaKnown RBP12.06□□□□□ -0.48
NUP188-207ENST00000487952 IGLV3-9A0A075B6K5 115 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 hCG_38984A0A1B0GV85 526 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 LOC107986453A0A1B0GWG9 222 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 PLSCR5A0PG75 271 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 MAGEA13PA6NCF6 341 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 OR4C45A6NMZ5 311 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 CD300LBA8K4G0 201 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 OGG1O15527 345 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 IGHV3-13P01766 116 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 BMP4P12644 408 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 ZNF12P17014 697 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 CELP19835 753 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 KITLGP21583 273 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 ACHEP22303 614 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 PSMB9P28065 219 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 DDOSTP39656 456 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 MAP2K3P46734 347 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 EVX1P49640 407 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 PRSS12P56730 875 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 FAM3AP98173 230 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 ACSM1Q08AH1 577 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 EFNB3Q15768 340 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 MSMPQ1L6U9 139 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 ZMAT1Q5H9K5 638 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 XAF1Q6GPH4 301 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 LRP11Q86VZ4 500 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 OR5AS1Q8N127 324 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 CCDC54Q8NEL0 328 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 OR56B2PQ8NGI1 322 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 ITFG2Q969R8 447 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 RNF166Q96A37 237 aaPredicted RBP12.05□□□□□ -0.48
NUP188-207ENST00000487952 MGLLQ99685 303 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 REPIN1Q9BWE0 567 aaKnown RBP12.05□□□□□ -0.48
NUP188-207ENST00000487952 PLEKHF2Q9H8W4 249 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 PLEKHA1Q9HB21 404 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 CBLN4Q9NTU7 201 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 CGGBP1Q9UFW8 167 aaPredicted RBP12.05□□□□□ -0.48
NUP188-207ENST00000487952 FBXO9Q9UK97 447 aaPredicted RBP12.05□□□□□ -0.48
NUP188-207ENST00000487952 HHLA2Q9UM44 414 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 EDARQ9UNE0 448 aa12.05□□□□□ -0.48
NUP188-207ENST00000487952 LOC390937A0A1W2PQ73 354 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 IQCF6A8MYZ5 107 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 H3BSH0 61 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 M0R233 179 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 DHRS3O75911 302 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 ISG15P05161 165 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 GSK3AP49840 483 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 MLLT11Q13015 90 aaPredicted RBP12.04□□□□□ -0.48
NUP188-207ENST00000487952 NEDD8Q15843 81 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 ALKBH6Q3KRA9 238 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 UBE2UQ5VVX9 321 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 DMKNQ6E0U4 476 aaPredicted RBP12.04□□□□□ -0.48
NUP188-207ENST00000487952 KCTD8Q6ZWB6 473 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 RDH10Q8IZV5 341 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 FTMTQ8N4E7 242 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 BHLHE23Q8NDY6 225 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 CSNK2A3Q8NEV1 391 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 SEMA6DQ8NFY4 1073 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 TSEN15Q8WW01 171 aaKnown RBP12.04□□□□□ -0.48
NUP188-207ENST00000487952 LYZL4Q96KX0 146 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 PDCD1LG2Q9BQ51 273 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 LAMP3Q9UQV4 416 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 NOP16Q9Y3C1 178 aaKnown RBP12.04□□□□□ -0.48
NUP188-207ENST00000487952 PMF1-BGLAPU3KQ54 211 aa12.04□□□□□ -0.48
NUP188-207ENST00000487952 UTP20O75691 2785 aaKnown RBP12.03□□□□□ -0.48
NUP188-207ENST00000487952 A0A1B0GTI1 187 aa12.03□□□□□ -0.48
NUP188-207ENST00000487952 ANKRD30BLA7E2S9 258 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms