RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	ZNF121	P58317	390 aa	Predicted RBP	6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	SUMO1	P63165	101 aa	Known RBP	6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	BDH1	Q02338	343 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	EMX1	Q04741	257 aa	Predicted RBP	6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	MFGE8	Q08431	387 aa	Predicted RBP	6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	MLLT11	Q13015	90 aa	Predicted RBP	6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	TIGD6	Q17RP2	521 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	C3orf36	Q3SXR2	165 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	FAM209A	Q5JX71	171 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	UBE2U	Q5VVX9	321 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	LIPN	Q5VXI9	398 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	ARL9	Q6T311	187 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	DRAM2	Q6UX65	266 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	TMEM108	Q6UXF1	575 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	MYPOP	Q86VE0	399 aa	Predicted RBP	6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	COMMD2	Q86X83	199 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	EGFL6	Q8IUX8	553 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZNF584	Q8IVC4	421 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	CPEB3	Q8NE35	698 aa	Known RBP	6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	SLC7A6	Q92536	515 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	UFD1	Q92890	307 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	MUL1	Q969V5	352 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	PELI1	Q96FA3	418 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	PGAM5	Q96HS1	289 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	C4orf45	Q96LM5	186 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	OR5M11	Q96RB7	305 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	DCLRE1C	Q96SD1	692 aa	Known RBP	6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	SP140L	Q9H930	580 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	ISG20L2	Q9H9L3	353 aa	Known RBP	6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	DLL4	Q9NR61	685 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	BABAM2	Q9NXR7	383 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	GRIP1	Q9Y3R0	1128 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	KLF2	Q9Y5W3	355 aa	Predicted RBP	6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	FREM1	Q5H8C1	2179 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	DIDO1	Q9BTC0	2240 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	LOC100509620	A0A075B734	347 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	IGHV2OR16-5	A0A0B4J2B6	119 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	PNMA8C	A0A1B0GUJ8	204 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	TMEM269	A0A1B0GVZ9	245 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	TRIM64C	A6NLI5	447 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565		E9PI62	339 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	CASK	O14936	926 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	INMT	O95050	263 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	CRYAA	P02489	173 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	LCAT	P04180	440 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	UBC	P0CG48	685 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	RNF224	P0DH78	156 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	CCL2	P13500	99 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	PCMT1	P22061	227 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	PTAFR	P25105	342 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	KIR2DL3	P43628	341 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	TGM4	P49221	684 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	NAAA	Q02083	359 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	SNTB1	Q13884	538 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	CDK5R1	Q15078	307 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	TST	Q16762	297 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	GFOD2	Q3B7J2	385 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	KRTAP27-1	Q3LI81	207 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	CCDC58	Q4VC31	144 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	WDR38	Q5JTN6	314 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	FOXB2	Q5VYV0	432 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	XAF1	Q6GPH4	301 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	UNQ6126/PRO20091	Q6UXV3	157 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	RFPL4B	Q6ZWI9	263 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	FAM57B	Q71RH2	274 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZNF676	Q8N7Q3	588 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZFP41	Q8N8Y5	198 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	DTX3	Q8N9I9	347 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZNF485	Q8NCK3	441 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	IL17RD	Q8NFM7	739 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	OR2G2	Q8NGZ5	317 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	APOBEC3D	Q96AK3	386 aa	Predicted RBP	6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	POM121L2	Q96KW2	1035 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	COG8	Q96MW5	612 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZNF75A	Q96N20	296 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	DACH2	Q96NX9	599 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	WFIKKN1	Q96NZ8	548 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	OPALIN	Q96PE5	141 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	MGLL	Q99685	303 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	KRTAP4-2	Q9BYR5	136 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	COMMD4	Q9H0A8	199 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	OR10A2	Q9H208	303 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	ESRP2	Q9H6T0	727 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	FAM206A	Q9NX38	181 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	EIF3K	Q9UBQ5	218 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	NUFIP1	Q9UHK0	495 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	ST6GALNAC2	Q9UJ37	374 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	OR52A1	Q9UKL2	312 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	N6AMT1	Q9Y5N5	214 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	SPTAN1	Q13813	2472 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	PCNX1	Q96RV3	2341 aa		6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	HELZ2	Q9BYK8	2649 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-218	ENST00000487565	TRBV2	A0A0J9YWF9	115 aa		6.6	□□□□□ -1.35
GARNL3-218	ENST00000487565		A0A1B0GVI7	797 aa		6.6	□□□□□ -1.35
GARNL3-218	ENST00000487565	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	6.6	□□□□□ -1.35
GARNL3-218	ENST00000487565	LOC107986453	A0A1B0GWG9	222 aa		6.6	□□□□□ -1.35
GARNL3-218	ENST00000487565	WIPF3	A6NGB9	483 aa		6.6	□□□□□ -1.35
GARNL3-218	ENST00000487565	ACOD1	A6NK06	481 aa		6.6	□□□□□ -1.35
GARNL3-218	ENST00000487565	TMEM212	A6NML5	194 aa		6.6	□□□□□ -1.35
GARNL3-218	ENST00000487565	PRSS44	E7EML9	344 aa		6.6	□□□□□ -1.35

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