RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 DVL1O14640 695 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 GMDSO60547 372 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 RENP00797 406 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 HLA-DQA2P01906 255 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 DLX1P56177 255 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 TPTEP56180 551 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 PDCD1Q15116 288 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 KCNJ8Q15842 424 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 GLYATL3Q5SZD4 288 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 LYPD4Q6UWN0 246 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 LDLRAD3Q86YD5 345 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 C11orf53Q8IXP5 236 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 ZSCAN4Q8NAM6 433 aaPredicted RBP13.34□□□□□ -0.27
SRRT-212ENST00000487311 PLPP7Q8NBV4 271 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 SDR9C7Q8NEX9 313 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 ZNF799Q96GE5 643 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 DDOQ99489 341 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 KCTD14Q9BQ13 255 aaPredicted RBP13.34□□□□□ -0.27
SRRT-212ENST00000487311 ADAT1Q9BUB4 502 aaKnown RBP13.34□□□□□ -0.27
SRRT-212ENST00000487311 SEMA6AQ9H2E6 1030 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 CNTD2Q9H8S5 307 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 VIPAS39Q9H9C1 493 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 KIF17Q9P2E2 1029 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 GGT3PA6NGU5 568 aa13.33□□□□□ -0.28
SRRT-212ENST00000487311 SLC22A2O15244 555 aa13.33□□□□□ -0.28
SRRT-212ENST00000487311 NDUFA2O43678 99 aa13.33□□□□□ -0.28
SRRT-212ENST00000487311 PYCR1P32322 319 aa13.33□□□□□ -0.28
SRRT-212ENST00000487311 RPL15P61313 204 aaKnown RBP13.33□□□□□ -0.28
SRRT-212ENST00000487311 SLC36A3Q495N2 470 aa13.33□□□□□ -0.28
SRRT-212ENST00000487311 SLC35F1Q5T1Q4 408 aa13.33□□□□□ -0.28
SRRT-212ENST00000487311 GLYATQ6IB77 296 aa13.33□□□□□ -0.28
SRRT-212ENST00000487311 FAM110DQ8TAY7 271 aaPredicted RBP13.33□□□□□ -0.28
SRRT-212ENST00000487311 FANK1Q8TC84 345 aa13.33□□□□□ -0.28
SRRT-212ENST00000487311 SEH1LQ96EE3 360 aa13.33□□□□□ -0.28
SRRT-212ENST00000487311 IFT27Q9BW83 186 aa13.33□□□□□ -0.28
SRRT-212ENST00000487311 SLC22A4Q9H015 551 aa13.33□□□□□ -0.28
SRRT-212ENST00000487311 PPP1R3EQ9H7J1 279 aa13.33□□□□□ -0.28
SRRT-212ENST00000487311 TCF7L1Q9HCS4 588 aa13.33□□□□□ -0.28
SRRT-212ENST00000487311 DCAF13Q9NV06 445 aaKnown RBP13.33□□□□□ -0.28
SRRT-212ENST00000487311 TVP23AA6NH52 213 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 SLC22A31A6NKX4 558 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 SLC2A1P11166 492 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 SLC6A6P31641 620 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 OTX1P32242 354 aaPredicted RBP13.32□□□□□ -0.28
SRRT-212ENST00000487311 TEX36Q5VZQ5 186 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 VMO1Q7Z5L0 202 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 WDR86Q86TI4 376 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 LNX2Q8N448 690 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 SCCPDHQ8NBX0 429 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 UBE2FQ969M7 185 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 CCL13Q99616 98 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 NSRP1Q9H0G5 558 aaKnown RBP13.32□□□□□ -0.28
SRRT-212ENST00000487311 EFCAB1Q9HAE3 211 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 MRPL15Q9P015 296 aaKnown RBP13.32□□□□□ -0.28
SRRT-212ENST00000487311 ABCD2Q9UBJ2 740 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 DNAJB11Q9UBS4 358 aa13.32□□□□□ -0.28
SRRT-212ENST00000487311 RPUSD1Q9UJJ7 312 aaKnown RBP13.32□□□□□ -0.28
SRRT-212ENST00000487311 A6NLC8 198 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 AMY2BP19961 511 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 NOS3P29474 1203 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.31□□□□□ -0.28
SRRT-212ENST00000487311 CDONQ4KMG0 1287 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 HIST2H2BDQ6DRA6 164 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 CYB561A3Q8NBI2 242 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 LY6G5BQ8NDX9 201 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 OR56B2PQ8NGI1 322 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 OR51L1Q8NGJ5 315 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 ST8SIA4Q92187 359 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 SPTSSAQ969W0 71 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 C16orf95Q9H693 158 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 KAAG1Q9UBP8 84 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 N6AMT1Q9Y5N5 214 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 V9GYQ6 96 aa13.31□□□□□ -0.28
SRRT-212ENST00000487311 hCG_1807616A0A1W2PRN6 198 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.3□□□□□ -0.28
SRRT-212ENST00000487311 BHLHE40O14503 412 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 GADD45GO95257 159 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 ECDO95905 644 aaPredicted RBP13.3□□□□□ -0.28
SRRT-212ENST00000487311 SEMG1P04279 462 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 ZNF823P16415 610 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 GSSP48637 474 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 NUDT2P50583 147 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 PRKXP51817 358 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 PSME3P61289 254 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 KRT72Q14CN4 511 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 HACD2Q6Y1H2 254 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 RNF148Q8N7C7 305 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 DPAGT1Q9H3H5 408 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 EGLN3Q9H6Z9 239 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 KRCC1Q9NPI7 259 aaPredicted RBP13.3□□□□□ -0.28
SRRT-212ENST00000487311 NOP16Q9Y3C1 178 aaKnown RBP13.3□□□□□ -0.28
SRRT-212ENST00000487311 KPTNQ9Y664 436 aa13.3□□□□□ -0.28
SRRT-212ENST00000487311 ZNF816-ZNF321PA0A0X1KG74 233 aa13.29□□□□□ -0.28
SRRT-212ENST00000487311 A0A1W2PRD5 423 aa13.29□□□□□ -0.28
SRRT-212ENST00000487311 A0A1W2PRF3 423 aa13.29□□□□□ -0.28
SRRT-212ENST00000487311 A0A1W2PRM7 423 aa13.29□□□□□ -0.28
SRRT-212ENST00000487311 IDH3BO43837 385 aa13.29□□□□□ -0.28
SRRT-212ENST00000487311 H2AFXP16104 143 aaPredicted RBP13.29□□□□□ -0.28
SRRT-212ENST00000487311 SPIBQ01892 262 aa13.29□□□□□ -0.28
SRRT-212ENST00000487311 PCK2Q16822 640 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms