RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 VPREB3Q9UKI3 123 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 AURKCQ9UQB9 309 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 KPTNQ9Y664 436 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 IGHV3OR15-7A0A075B7D8 119 aa16■□□□□ 0.15
SMPDL3A-202ENST00000487215 ZNF816-ZNF321PA0A0X1KG74 233 aa16■□□□□ 0.15
SMPDL3A-202ENST00000487215 M0R135 149 aa16■□□□□ 0.15
SMPDL3A-202ENST00000487215 GRPP07492 148 aa16■□□□□ 0.15
SMPDL3A-202ENST00000487215 COX4I1P13073 169 aa16■□□□□ 0.15
SMPDL3A-202ENST00000487215 EGR3Q06889 387 aa16■□□□□ 0.15
SMPDL3A-202ENST00000487215 SEC23BQ15437 767 aa16■□□□□ 0.15
SMPDL3A-202ENST00000487215 BEAN1Q3B7T3 259 aa16■□□□□ 0.15
SMPDL3A-202ENST00000487215 SLC36A3Q495N2 470 aa16■□□□□ 0.15
SMPDL3A-202ENST00000487215 OR2AE1Q8NHA4 323 aa16■□□□□ 0.15
SMPDL3A-202ENST00000487215 ZNF799Q96GE5 643 aa16■□□□□ 0.15
SMPDL3A-202ENST00000487215 MAP6Q96JE9 813 aa16■□□□□ 0.15
SMPDL3A-202ENST00000487215 RPRD1BQ9NQG5 326 aaKnown RBP16■□□□□ 0.15
SMPDL3A-202ENST00000487215 KAAG1Q9UBP8 84 aa16■□□□□ 0.15
SMPDL3A-202ENST00000487215 FAM32AQ9Y421 112 aaKnown RBP16■□□□□ 0.15
SMPDL3A-202ENST00000487215 TRBV4-1A0A0J9YWV2 114 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 A0A1B0GVI7 797 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 A0A1B0GW55 424 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 hCG_1807616A0A1W2PRN6 198 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 BTBD17A6NE02 478 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 GGT3PA6NGU5 568 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 A6NLC8 198 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 G3V4G9 280 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 RENP00797 406 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 FBP1P09467 338 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 DUX4L2P0CJ85 424 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 DUX4L3P0CJ86 424 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 DUX4L4P0CJ87 422 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 DUX4L5P0CJ88 424 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 DUX4L6P0CJ89 424 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 DUX4L7P0CJ90 424 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 HIST1H1CP16403 213 aaKnown RBP15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 RFX4Q33E94 735 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 TEX36Q5VZQ5 186 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 DUX4L9Q6RFH8 374 aaPredicted RBP15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 HACD2Q6Y1H2 254 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 ZBTB46Q86UZ6 589 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 OR4K13Q8NH42 304 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 FAM162AQ96A26 154 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 FN3KQ9H479 309 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 KRCC1Q9NPI7 259 aaPredicted RBP15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 MRPL15Q9P015 296 aaKnown RBP15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 ONECUT1Q9UBC0 465 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 DUX4Q9UBX2 424 aa15.99■□□□□ 0.15
SMPDL3A-202ENST00000487215 LHBP01229 141 aa15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 SLC7A2P52569 658 aa15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 ELF3P78545 371 aaPredicted RBP15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 GLYATL3Q5SZD4 288 aa15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 METAP1DQ6UB28 335 aaPredicted RBP15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 SPERTQ8NA61 448 aa15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 LY6G5BQ8NDX9 201 aa15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 FANK1Q8TC84 345 aa15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 SPTSSAQ969W0 71 aa15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 KCTD14Q9BQ13 255 aaPredicted RBP15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 SIRT7Q9NRC8 400 aa15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 MRPL22Q9NWU5 206 aaKnown RBP15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 NDUFAF4Q9P032 175 aa15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 CAB39Q9Y376 341 aaPredicted RBP15.98■□□□□ 0.15
SMPDL3A-202ENST00000487215 NME4O00746 187 aa15.97■□□□□ 0.15
SMPDL3A-202ENST00000487215 ARPC3O15145 178 aa15.97■□□□□ 0.15
SMPDL3A-202ENST00000487215 GMNNO75496 209 aa15.97■□□□□ 0.15
SMPDL3A-202ENST00000487215 HLA-DQA2P01906 255 aa15.97■□□□□ 0.15
SMPDL3A-202ENST00000487215 SLC6A6P31641 620 aa15.97■□□□□ 0.15
SMPDL3A-202ENST00000487215 TGFBR2P37173 567 aa15.97■□□□□ 0.15
SMPDL3A-202ENST00000487215 PRB3Q04118 309 aaPredicted RBP15.97■□□□□ 0.15
SMPDL3A-202ENST00000487215 NPRL2Q8WTW4 380 aa15.97■□□□□ 0.15
SMPDL3A-202ENST00000487215 OR52D1Q9H346 318 aa15.97■□□□□ 0.15
SMPDL3A-202ENST00000487215 ADA2Q9NZK5 511 aa15.97■□□□□ 0.15
SMPDL3A-202ENST00000487215 OR6C68A6NDL8 312 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 NCK1P16333 377 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 RHCEP18577 417 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 OTX1P32242 354 aaPredicted RBP15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 RPS27P42677 84 aaKnown RBP15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 GSK3BP49841 420 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 DLX1P56177 255 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 PCK2Q16822 640 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 KPRPQ5T749 579 aaPredicted RBP15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 LNX2Q8N448 690 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 SDR9C7Q8NEX9 313 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 OR56B2PQ8NGI1 322 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 OR52J3Q8NH60 311 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 CMTM5Q96DZ9 223 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 CCL13Q99616 98 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 FUZQ9BT04 418 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 C14orf119Q9NWQ9 140 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 KCNG2Q9UJ96 466 aa15.96■□□□□ 0.15
SMPDL3A-202ENST00000487215 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 A0A1W2PRD5 423 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 A0A1W2PRF3 423 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 A0A1W2PRM7 423 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 RNASEK-C17orf49H0YIS7 233 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 BHLHE40O14503 412 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 NPFFO15130 113 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 DIRAS1O95057 198 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 ALX3O95076 343 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 PRB2P02812 416 aaPredicted RBP15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 NUDT2P50583 147 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms