RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 NDUFB6O95139 128 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 LIMS3P0CW19 117 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 LIMS4P0CW20 117 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 SLC25A1P53007 311 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 METAP1P53582 386 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 DMWDQ09019 674 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 PPP1R3CQ9UQK1 317 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 A0A1W2PPC4 97 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 FAM221AA4D161 298 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 CRYM-AS1A6NIL9 109 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 H7BYZ3 331 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 FABP6P51161 128 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 EMP3P54852 163 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 GFERP55789 205 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 PIGPP57054 158 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 OR8G1Q15617 311 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 ZNF626Q68DY1 528 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 SKA3Q8IX90 412 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 SHARPINQ9H0F6 387 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 PAPPAQ13219 1627 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 CD37P11049 281 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 SUMO3P55854 103 aaPredicted RBP14.84□□□□□ -0.03
COL7A1-210ENST00000487017 LRP12Q9Y561 859 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 WNT1P04628 370 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 GNB1P62873 340 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 C11orf87Q6NUJ2 197 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 C6orf15Q6UXA7 325 aaPredicted RBP14.84□□□□□ -0.03
COL7A1-210ENST00000487017 KTI12Q96EK9 354 aaPredicted RBP14.84□□□□□ -0.03
COL7A1-210ENST00000487017 RNF150Q9ULK6 438 aa14.84□□□□□ -0.03
COL7A1-210ENST00000487017 NKX2-2O95096 273 aa14.83□□□□□ -0.03
COL7A1-210ENST00000487017 ARR3P36575 388 aa14.83□□□□□ -0.03
COL7A1-210ENST00000487017 PRAMEF5Q5TYX0 476 aa14.83□□□□□ -0.03
COL7A1-210ENST00000487017 PRAMEF6Q5VXH4 476 aa14.83□□□□□ -0.03
COL7A1-210ENST00000487017 ZNF425Q6IV72 752 aa14.83□□□□□ -0.03
COL7A1-210ENST00000487017 TMEM123Q8N131 208 aa14.83□□□□□ -0.03
COL7A1-210ENST00000487017 ZNF687Q8N1G0 1237 aa14.83□□□□□ -0.03
COL7A1-210ENST00000487017 KCNE4Q8WWG9 221 aa14.83□□□□□ -0.03
COL7A1-210ENST00000487017 SLC17A5Q9NRA2 495 aa14.83□□□□□ -0.03
COL7A1-210ENST00000487017 C20orf141Q9NUB4 165 aa14.83□□□□□ -0.03
COL7A1-210ENST00000487017 hCG_1809904A0A1W2PP81 198 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 A0A1W2PPE2 198 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 A0A1W2PR64 198 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 A0A1W2PRV1 198 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 OR2J2O76002 312 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 SPANXN5Q5MJ07 72 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 ANGPTL6Q8NI99 470 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 ANKUB1A6NFN9 424 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 SH2D1BO14796 132 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 NDUFB7P17568 137 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 FOXF1Q12946 379 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 INSL4Q14641 139 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 TMEM128Q5BJH2 165 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 LCN15Q6UWW0 184 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 IFI44Q8TCB0 444 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 NUDT9Q9BW91 350 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 MEIKINA0A087WXM9 373 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 OR6C68A6NDL8 312 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 IL3RAP26951 378 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 DHODHQ02127 395 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 OR5AP2Q8NGF4 316 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 ZP3P21754 424 aa14.83□□□□□ -0.04
COL7A1-210ENST00000487017 TOMM34Q15785 309 aaPredicted RBP14.83□□□□□ -0.04
COL7A1-210ENST00000487017 ZGLP1P0C6A0 271 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 ST3GAL2Q16842 350 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 ELFN2Q5R3F8 820 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 LHX8Q68G74 356 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 KMT5CQ86Y97 462 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 ZNF573Q86YE8 665 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 TMEM104Q8NE00 496 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 NOXO1Q8NFA2 376 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 OR5M8Q8NGP6 311 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 OR8U1Q8NH10 309 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 RTN4IP1Q8WWV3 396 aaPredicted RBP14.82□□□□□ -0.04
COL7A1-210ENST00000487017 RDH5Q92781 318 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 EID2BQ96D98 161 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 ZNF768Q9H5H4 540 aaKnown RBP14.82□□□□□ -0.04
COL7A1-210ENST00000487017 MMP25Q9NPA2 562 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 C5orf49A4QMS7 147 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 RAG2P55895 527 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 FAM185AQ8N0U4 392 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 FAM58AQ8N1B3 248 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 PELI1Q96FA3 418 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 SERPINE3A8MV23 424 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 C21orf58P58505 322 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 PDZD11Q5EBL8 140 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 ADGRL4Q9HBW9 690 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 LIN7CQ9NUP9 197 aaKnown RBP14.82□□□□□ -0.04
COL7A1-210ENST00000487017 HDGFL3Q9Y3E1 203 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 SIRPB1O00241 398 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 WDR1O75083 606 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 ARRDC1Q8N5I2 433 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 KIAA1958Q8N8K9 716 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 AMER3Q8N944 861 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 OR4S1Q8NGB4 309 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 ALG14Q96F25 216 aa14.82□□□□□ -0.04
COL7A1-210ENST00000487017 ZNF727A8MUV8 499 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 PCBP3P57721 371 aaKnown RBP14.81□□□□□ -0.04
COL7A1-210ENST00000487017 GPR119Q8TDV5 335 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 MAP6Q96JE9 813 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 NDRG3Q9UGV2 375 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms