RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 MAP1LC3CQ9BXW4 147 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 PRDM7Q9NQW5 492 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 SIT1Q9Y3P8 196 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 CLEC18AA5D8T8 446 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 FAM24AA6NFZ4 105 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 GFRA2O00451 464 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 EIF1BO60739 113 aaKnown RBP7.97□□□□□ -1.13
GABRE-209ENST00000486255 PVRP15151 417 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 OR10J1P30954 320 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 GJA4P35212 333 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 ADRA1AP35348 466 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 ISL1P61371 349 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 PAX5Q02548 391 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 RBPJQ06330 500 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 HLXQ14774 488 aaPredicted RBP7.97□□□□□ -1.13
GABRE-209ENST00000486255 TMEFF1Q8IYR6 380 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 ARHGEF39Q8N4T4 335 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 CLEC18CQ8NCF0 446 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 OR5A2Q8NGI9 324 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 MRPS24Q96EL2 167 aaKnown RBP7.97□□□□□ -1.13
GABRE-209ENST00000486255 OR2A14Q96R47 310 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 NPAS1Q99742 590 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 ZNF385DQ9H6B1 395 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 H0YIV9 168 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 CLDN34H7C241 214 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 DUS4LO95620 317 aaKnown RBP7.97□□□□□ -1.13
GABRE-209ENST00000486255 MT-ATP6P00846 226 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 PI3P19957 117 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 BCL6P41182 706 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 FAM3AP98173 230 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 FABP5Q01469 135 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 SSBP1Q04837 148 aaKnown RBP7.97□□□□□ -1.13
GABRE-209ENST00000486255 GLDNQ6ZMI3 551 aaPredicted RBP7.97□□□□□ -1.13
GABRE-209ENST00000486255 CDCA4Q9BXL8 241 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 TRAPPC4Q9Y296 219 aa7.97□□□□□ -1.13
GABRE-209ENST00000486255 PRKRAO75569 313 aaKnown RBP7.96□□□□□ -1.13
GABRE-209ENST00000486255 SMIM6P0DI80 62 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 GLI4P10075 376 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 SDHBP21912 280 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 GNG4P50150 75 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 CTSCP53634 463 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 SPCS3P61009 180 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 CLPPQ16740 277 aaPredicted RBP7.96□□□□□ -1.13
GABRE-209ENST00000486255 OR2W3Q7Z3T1 314 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 MARCH3Q86UD3 253 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 SLC39A11Q8N1S5 342 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 LINC01465Q8N7H1 131 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 ARRDC3Q96B67 414 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 PACRGQ96M98 296 aaPredicted RBP7.96□□□□□ -1.13
GABRE-209ENST00000486255 SPOCK3Q9BQ16 436 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 NTNG1Q9Y2I2 539 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 HTR1DP28221 377 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 RPS16P62249 146 aaKnown RBP7.96□□□□□ -1.13
GABRE-209ENST00000486255 PRAMEF20Q5VT98 475 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 CST9Q5W186 159 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 LCORQ96JN0 433 aaPredicted RBP7.96□□□□□ -1.13
GABRE-209ENST00000486255 PRR14Q9BWN1 585 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 IL21Q9HBE4 155 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 P4HTMQ9NXG6 502 aa7.96□□□□□ -1.13
GABRE-209ENST00000486255 SH2D7A6NKC9 451 aaPredicted RBP7.96□□□□□ -1.14
GABRE-209ENST00000486255 DRGXA6NNA5 263 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 H0YGG7 62 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 XRCC2O43543 280 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 SEMG1P04279 462 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 CYC1P08574 325 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 EGR3Q06889 387 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 ZNF816Q0VGE8 651 aaPredicted RBP7.96□□□□□ -1.14
GABRE-209ENST00000486255 ZNF385BQ569K4 471 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 FAM78BQ5VT40 261 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 PAQR6Q6TCH4 344 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 C19orf47Q8N9M1 422 aaKnown RBP7.96□□□□□ -1.14
GABRE-209ENST00000486255 BCL2L2Q92843 193 aaPredicted RBP7.96□□□□□ -1.14
GABRE-209ENST00000486255 TMEM230Q96A57 120 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 ISG20Q96AZ6 181 aaKnown RBP7.96□□□□□ -1.14
GABRE-209ENST00000486255 GLIPR2Q9H4G4 154 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 ZNF785A8K8V0 405 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 SIGLEC6O43699 453 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 GJB3O75712 270 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 SLC2A10O95528 541 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 TEAD1P28347 426 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 MMP15P51511 669 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 GPNMBQ14956 572 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 ELOBQ15370 118 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 C12orf49Q9H741 205 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 DUSP13Q9UII6 198 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 HCRTR1O43613 425 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 ZNF737O75373 536 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 IL5P05113 134 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 SCGB1A1P11684 91 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 SUCLG1P53597 346 aaKnown RBP7.96□□□□□ -1.14
GABRE-209ENST00000486255 SELENBP1Q13228 472 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 C1orf140Q5VVS0 124 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 RBM45Q8IUH3 476 aaKnown RBP7.96□□□□□ -1.14
GABRE-209ENST00000486255 ZNF547Q8IVP9 402 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 OR4S1Q8NGB4 309 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 GOT1L1Q8NHS2 421 aaPredicted RBP7.96□□□□□ -1.14
GABRE-209ENST00000486255 OPALINQ96PE5 141 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 SLC35B3Q9H1N7 401 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 CACFD1Q9UGQ2 172 aa7.96□□□□□ -1.14
GABRE-209ENST00000486255 MMP24Q9Y5R2 645 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms