RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 USF3Q68DE3 2245 aa13.11□□□□□ -0.31
HDHD3-203ENST00000485934 CSMD1Q96PZ7 3565 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 IGHV1-69-2A0A0G2JMI3 117 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.1□□□□□ -0.31
HDHD3-203ENST00000485934 A0A0U1RQV5 110 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 ZSCAN5BA6NJL1 495 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 LOC110117498-PIK3R3F6TDL0 507 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 MTRF1O75570 445 aaKnown RBP13.1□□□□□ -0.31
HDHD3-203ENST00000485934 RPSAP08865 295 aaKnown RBP13.1□□□□□ -0.31
HDHD3-203ENST00000485934 DBTP11182 482 aaKnown RBP13.1□□□□□ -0.31
HDHD3-203ENST00000485934 GIFP27352 417 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 MAGEB1P43366 347 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 HSPA13P48723 471 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 CSNK2BP67870 215 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 OR5AS1Q8N127 324 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 CELF2-AS1Q8N7Q2 184 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 BHLHE23Q8NDY6 225 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 TIMD4Q96H15 378 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 MRPS18AQ9NVS2 196 aaKnown RBP13.1□□□□□ -0.31
HDHD3-203ENST00000485934 SNX5Q9Y5X3 404 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 R4GMQ9 66 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 ARID1AO14497 2285 aa13.1□□□□□ -0.31
HDHD3-203ENST00000485934 PRRC2AP48634 2157 aaKnown RBP13.1□□□□□ -0.31
HDHD3-203ENST00000485934 CSMD2Q7Z408 3487 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 H7C1Q1 480 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 PSMD9O00233 223 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 HPXP02790 462 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 HEXAP06865 529 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 INHBBP09529 407 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 GNALP38405 381 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 ZNF91Q05481 1191 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 MRPL28Q13084 256 aaKnown RBP13.09□□□□□ -0.31
HDHD3-203ENST00000485934 CCDC54Q8NEL0 328 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 OR2AE1Q8NHA4 323 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 TFAP2CQ92754 450 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 ERGIC1Q969X5 290 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 TBX5Q99593 518 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 PBOV1Q9GZY1 135 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 FAM206AQ9NX38 181 aa13.09□□□□□ -0.31
HDHD3-203ENST00000485934 CHCHD3Q9NX63 227 aaKnown RBP13.09□□□□□ -0.31
HDHD3-203ENST00000485934 NUFIP1Q9UHK0 495 aaKnown RBP13.09□□□□□ -0.31
HDHD3-203ENST00000485934 A0A1B0GWJ7 208 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 TRIM64A6NGJ6 449 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 TRIM64BA6NI03 449 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 LY6HO94772 140 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 USF1P22415 310 aaPredicted RBP13.08□□□□□ -0.32
HDHD3-203ENST00000485934 DCKP27707 260 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 NR4A2P43354 598 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 MAP2K3P46734 347 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 GSK3AP49840 483 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 ISL1P61371 349 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 FAM3AP98173 230 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 LOXL1Q08397 574 aaPredicted RBP13.08□□□□□ -0.32
HDHD3-203ENST00000485934 OR8G1Q15617 311 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 GFOD2Q3B7J2 385 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 BCL2L15Q5TBC7 163 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 THAP5Q7Z6K1 395 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 BIVMQ86UB2 503 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 COMMD2Q86X83 199 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 PLPP7Q8NBV4 271 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 RAB1CQ92928 201 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 LGALS12Q96DT0 336 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 COX4I2Q96KJ9 171 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 C14orf119Q9NWQ9 140 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 MRM2Q9UI43 246 aaKnown RBP13.08□□□□□ -0.32
HDHD3-203ENST00000485934 GTF2A1LQ9UNN4 478 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 PPP1R3CQ9UQK1 317 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 OTOGQ6ZRI0 2925 aa13.08□□□□□ -0.32
HDHD3-203ENST00000485934 IGHV4-30-2A0A087WSY4 118 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 LRRC30A6NM36 301 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 ANXA2P2A6NMY6 339 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 CLDN25C9JDP6 229 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 RNF223E7ERA6 249 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 J3QRE1 110 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 APOL3O95236 402 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 ATP6V1G2O95670 118 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 ZNF12P17014 697 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 GPR6P46095 362 aaPredicted RBP13.07□□□□□ -0.32
HDHD3-203ENST00000485934 RIN1Q13671 783 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 GALEQ14376 348 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 OR8B8Q15620 311 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 LIPNQ5VXI9 398 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 Q6ZR03 302 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 ELMOD2Q8IZ81 293 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 OR8B12Q8NGG6 310 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 OR56B2PQ8NGI1 322 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 OR8S1Q8NH09 359 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 CCL17Q92583 94 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 HPS1Q92902 700 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 HIST1H2AAQ96QV6 131 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 OR2V2Q96R30 315 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 SIGLEC11Q96RL6 698 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 AMBNQ9NP70 447 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 GNG8Q9UK08 70 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 OR52A1Q9UKL2 312 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 MPC1Q9Y5U8 109 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 RTTNQ86VV8 2226 aa13.07□□□□□ -0.32
HDHD3-203ENST00000485934 hCG_38984A0A1B0GV85 526 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 VWC2LB2RUY7 222 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 PPIHO43447 177 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms