RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 PRR23D2P0DMB1 279 aaPredicted RBP4.82□□□□□ -1.64
CUX1-208ENST00000485792 ZNF823P16415 610 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 GABRB1P18505 474 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 CCNOP22674 350 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 THBS2P35442 1172 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 ZNF81P51508 661 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 ARHGDIAP52565 204 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 SELENOVP59797 346 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 ISL1P61371 349 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 CCL8P80075 99 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 SRSF2Q01130 221 aaKnown RBP4.82□□□□□ -1.64
CUX1-208ENST00000485792 MAB21L1Q13394 359 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 HLXQ14774 488 aaPredicted RBP4.82□□□□□ -1.64
CUX1-208ENST00000485792 KPNB1Q14974 876 aaKnown RBP4.82□□□□□ -1.64
CUX1-208ENST00000485792 FAM76BQ5HYJ3 339 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 C6orf52Q5T4I8 152 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 NXNL2Q5VZ03 156 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 CCDC121Q6ZUS5 278 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 SHFQ7M4L6 423 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 SSX6Q7RTT6 188 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.82□□□□□ -1.64
CUX1-208ENST00000485792 ATG16L2Q8NAA4 619 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 ICA1LQ8NDH6 482 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 PROKR2Q8NFJ6 384 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 OR5L1Q8NGL2 311 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 ABHD4Q8TB40 342 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 TMEM163Q8TC26 289 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 Q8TCH9 128 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 PYDC1Q8WXC3 89 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 DACT3Q96B18 629 aaPredicted RBP4.82□□□□□ -1.64
CUX1-208ENST00000485792 MSI2Q96DH6 328 aaKnown RBP4.82□□□□□ -1.64
CUX1-208ENST00000485792 SLAMF6Q96DU3 332 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 ZNF799Q96GE5 643 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 INTS14Q96SY0 518 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 CIB1Q99828 191 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 PIMREGQ9BSJ6 248 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 TOR3AQ9H497 397 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 RERGLQ9H628 205 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 ZNF556Q9HAH1 456 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 GCM1Q9NP62 436 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 DYNLRB1Q9NP97 96 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 IL19Q9UHD0 177 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 OAZ3Q9UMX2 235 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 PPIAL4EA0A075B759 164 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 PPIAL4CA0A0B4J2A2 164 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 IGHV1-69-2A0A0G2JMI3 117 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 F5H0A9 414 aaPredicted RBP4.81□□□□□ -1.64
CUX1-208ENST00000485792 PPIAL4DF5H284 164 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 H3BN98 237 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 IFNL4K9M1U5 179 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 SLC16A6O15403 523 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 MAGEB4O15481 346 aaPredicted RBP4.81□□□□□ -1.64
CUX1-208ENST00000485792 LHBP01229 141 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 IGHV2-70P01814 119 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 ERCC1P07992 297 aaPredicted RBP4.81□□□□□ -1.64
CUX1-208ENST00000485792 PPIAL4FP0DN26 164 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 SLC2A1P11166 492 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 CPT2P23786 658 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 IGFBP5P24593 272 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 GCH1P30793 250 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 CFHR2P36980 270 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 DDOSTP39656 456 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 PMELP40967 661 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 CD200P41217 278 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 CHN2P52757 468 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 HCCSP53701 268 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 CDH15P55291 814 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 TPTEP56180 551 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 SEC61A1P61619 476 aaKnown RBP4.81□□□□□ -1.64
CUX1-208ENST00000485792 SNRPGP62308 76 aaKnown RBP4.81□□□□□ -1.64
CUX1-208ENST00000485792 GRB2P62993 217 aaKnown RBP4.81□□□□□ -1.64
CUX1-208ENST00000485792 FAM3AP98173 230 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 PAX2Q02962 417 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 ZNF92Q03936 586 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 MFGE8Q08431 387 aaPredicted RBP4.81□□□□□ -1.64
CUX1-208ENST00000485792 TMED1Q13445 227 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 OR8B8Q15620 311 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 SNAPC1Q16533 368 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 ZMAT1Q5H9K5 638 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 LAIR2Q6ISS4 152 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 PLBD1Q6P4A8 553 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 TMEM154Q6P9G4 183 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 IL17RELQ6ZVW7 336 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 MEPCEQ7L2J0 689 aaKnown RBP4.81□□□□□ -1.64
CUX1-208ENST00000485792 CXXC5Q7LFL8 322 aaKnown RBP4.81□□□□□ -1.64
CUX1-208ENST00000485792 SLC16A9Q7RTY1 509 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 LRRC28Q86X40 367 aaPredicted RBP4.81□□□□□ -1.64
CUX1-208ENST00000485792 KLBQ86Z14 1044 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 EGFL6Q8IUX8 553 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 FGFRL1Q8N441 504 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 OR2AJ1Q8NGZ0 328 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 OR13G1Q8NGZ3 307 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 OR2AE1Q8NHA4 323 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 TRUB1Q8WWH5 349 aaKnown RBP4.81□□□□□ -1.64
CUX1-208ENST00000485792 SPTSSAQ969W0 71 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 ERGIC1Q969X5 290 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 SGK3Q96BR1 496 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 CYYR1Q96J86 154 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 LYZL4Q96KX0 146 aa4.81□□□□□ -1.64
CUX1-208ENST00000485792 PITX2Q99697 317 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms