RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 RGCCQ9H4X1 137 aa8.47□□□□□ -1.05
CPSF4-213ENST00000484112 WARS2Q9UGM6 360 aaKnown RBP8.47□□□□□ -1.05
CPSF4-213ENST00000484112 PCDHGB1Q9Y5G3 927 aa8.47□□□□□ -1.05
CPSF4-213ENST00000484112 TRAV20A0A0B4J274 112 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 A0A1B0GWJ7 208 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 E9PQ18 207 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 H0YHG0 523 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 IFNL4K9M1U5 179 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 CDC14BO60729 498 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 AVPP01185 164 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 IGHV1-46P01743 117 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 ANPEPP15144 967 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 ADRA2CP18825 462 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 ALOX5APP20292 161 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 EPHA2P29317 976 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 DDOSTP39656 456 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 RPS27P42677 84 aaKnown RBP8.46□□□□□ -1.06
CPSF4-213ENST00000484112 SLC6A9P48067 706 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 LMO4P61968 165 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 ROM1Q03395 351 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 MVKQ03426 396 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 RIPK1Q13546 671 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 GK2Q14410 553 aaPredicted RBP8.46□□□□□ -1.06
CPSF4-213ENST00000484112 AVPI1Q5T686 147 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 LYPD4Q6UWN0 246 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 C1orf229Q6ZS94 237 aaPredicted RBP8.46□□□□□ -1.06
CPSF4-213ENST00000484112 USP43Q70EL4 1123 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 PGAP1Q75T13 922 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 KLBQ86Z14 1044 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.46□□□□□ -1.06
CPSF4-213ENST00000484112 BPIFB2Q8N4F0 458 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 CBR4Q8N4T8 237 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 PACRGLQ8N7B6 248 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 OR8G5Q8NG78 346 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 OR13G1Q8NGZ3 307 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 SPSB4Q96A44 273 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 MYCBPQ99417 103 aaPredicted RBP8.46□□□□□ -1.06
CPSF4-213ENST00000484112 SLC6A7Q99884 636 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 SUCNR1Q9BXA5 334 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 MROQ9BYG7 248 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 SAP30LQ9HAJ7 183 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 CENPMQ9NSP4 180 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 IL19Q9UHD0 177 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 LAMP5Q9UJQ1 280 aa8.46□□□□□ -1.06
CPSF4-213ENST00000484112 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.46□□□□□ -1.06
CPSF4-213ENST00000484112 IGHV1-69-2A0A0G2JMI3 117 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 CCDC182A6NF36 153 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 PLPP2O43688 288 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 SELENOFO60613 162 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 NCR1O76036 304 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 H2BFMP0C1H6 154 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 PSKH1P11801 424 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 HTR1FP30939 366 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 MAGEB1P43366 347 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 CX3CR1P49238 355 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 SNRPGP62308 76 aaKnown RBP8.45□□□□□ -1.06
CPSF4-213ENST00000484112 ELF3P78545 371 aaPredicted RBP8.45□□□□□ -1.06
CPSF4-213ENST00000484112 EGR3Q06889 387 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 MZT1Q08AG7 82 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 HFEQ30201 348 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 MRPL21Q7Z2W9 205 aaKnown RBP8.45□□□□□ -1.06
CPSF4-213ENST00000484112 EGFL6Q8IUX8 553 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 ZNF679Q8IYX0 411 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 FTMTQ8N4E7 242 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 TEX29Q8N6K0 151 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 ZNF283Q8N7M2 679 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 CELF2-AS1Q8N7Q2 184 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 BBS1Q8NFJ9 593 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 THEM6Q8WUY1 208 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 C22orf15Q8WYQ4 148 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 ERGIC1Q969X5 290 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 IL4I1Q96RQ9 567 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 SLC30A2Q9BRI3 323 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 OR10A2Q9H208 303 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 ZNF665Q9H7R5 613 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 CLN6Q9NWW5 311 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 IMPAD1Q9NX62 359 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 PTTG3PQ9NZH4 202 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 MRPL15Q9P015 296 aaKnown RBP8.45□□□□□ -1.06
CPSF4-213ENST00000484112 PPIAL4AQ9Y536 164 aa8.45□□□□□ -1.06
CPSF4-213ENST00000484112 A0A0G2JMP0 313 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 A0A0X1KG70 313 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 ZSCAN5BA6NJL1 495 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 TMPRSS2O15393 492 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 SLC16A6O15403 523 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 TPD52L2O43399 206 aaKnown RBP8.44□□□□□ -1.06
CPSF4-213ENST00000484112 SPRY3O43610 288 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 GMDSO60547 372 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 RP2O75695 350 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 FSTL3O95633 263 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 BAG2O95816 211 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 SBK2P0C263 348 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 OR2T7P0C7T2 308 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 CPT2P23786 658 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 POLR2IP36954 125 aaKnown RBP8.44□□□□□ -1.06
CPSF4-213ENST00000484112 NAA10P41227 235 aaPredicted RBP8.44□□□□□ -1.06
CPSF4-213ENST00000484112 SRP9P49458 86 aaKnown RBP8.44□□□□□ -1.06
CPSF4-213ENST00000484112 PSMA6P60900 246 aaKnown RBP8.44□□□□□ -1.06
CPSF4-213ENST00000484112 CCL8P80075 99 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 TNFAIP6P98066 277 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms