RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 IFT46Q9NQC8 304 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 BIN3Q9NQY0 253 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 POLE4Q9NR33 117 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 SLC17A5Q9NRA2 495 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 SPANXB1Q9NS25 103 aaPredicted RBP1.55□□□□□ -2.16
ITGB1-213ENST00000484088 IMP3Q9NV31 184 aaKnown RBP1.55□□□□□ -2.16
ITGB1-213ENST00000484088 DDIT4Q9NX09 232 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 BABAM2Q9NXR7 383 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 SPANXCQ9NY87 97 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 ANAPC11Q9NYG5 84 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 TREM2Q9NZC2 230 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 MAT2BQ9NZL9 334 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 OPN4Q9UHM6 478 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 ZNF225Q9UK10 706 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 PITPNC1Q9UKF7 332 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 OR52A1Q9UKL2 312 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 IKZF2Q9UKS7 526 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 RAB26Q9ULW5 256 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 UBQLN1Q9UMX0 589 aaKnown RBP1.55□□□□□ -2.16
ITGB1-213ENST00000484088 PSG11Q9UQ72 335 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 TP53TG5Q9Y2B4 290 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 POFUT2Q9Y2G5 429 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 ZNF256Q9Y2P7 627 aaPredicted RBP1.55□□□□□ -2.16
ITGB1-213ENST00000484088 ACOT9Q9Y305 439 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 GOLT1BQ9Y3E0 138 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 TBL2Q9Y4P3 447 aaKnown RBP1.55□□□□□ -2.16
ITGB1-213ENST00000484088 MMACHCQ9Y4U1 282 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 HSPB11Q9Y547 144 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 TIMM10BQ9Y5J6 103 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 OR51B4Q9Y5P0 310 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 ALG6Q9Y672 507 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 ALG5Q9Y673 324 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 SLC22A7Q9Y694 548 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 CHD4Q14839 1912 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 USP42Q9H9J4 1324 aaKnown RBP1.55□□□□□ -2.16
ITGB1-213ENST00000484088 SOGA1O94964 1423 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 FAM135BQ49AJ0 1406 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 ADGRL3Q9HAR2 1447 aa1.55□□□□□ -2.16
ITGB1-213ENST00000484088 AQRO60306 1485 aaKnown RBP eCLIP1.55□□□□□ -2.163e-6■□□□□ 10.3
ITGB1-213ENST00000484088 COL16A1Q07092 1604 aaPredicted RBP1.55□□□□□ -2.16
ITGB1-213ENST00000484088 A0A0G2JLM5 398 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 LINC00587B1AMM8 73 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 C9J4A7 227 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 F8VP50 259 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 G3V2T6 193 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 MKRN2OSH3BPM6 223 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 GFYI3L273 518 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 hCG_2039718K7EN88 272 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 HAS3O00219 553 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 CCRL2O00421 344 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 RFXANKO14593 260 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 PRMT5O14744 637 aaPredicted RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 TNFSF11O14788 317 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 NBR2O15453 112 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 NUPL2O15504 423 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 XRCC2O43543 280 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 TRAF3IP2O43734 574 aaPredicted RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 SSNA1O43805 119 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 TIMM8AO60220 97 aaPredicted RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 CCDC22O60826 627 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 GGCTO75223 188 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 SPAG7O75391 227 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 OR2B3O76000 313 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 AQP8O94778 261 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 SUPT7LO94864 414 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 GLSO94925 669 aaPredicted RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 OR2F2O95006 317 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 AP2A1O95782 977 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 FGGP02679 453 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 PPBPP02775 128 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 C2P06681 752 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 GP1BAP07359 652 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 DCNP07585 359 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 FBP1P09467 338 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 ZNF806P0C7X5 589 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 C1GALT1C1LP0DN25 315 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 IFI30P13284 250 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 RNH1P13489 461 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 ICAM2P13598 275 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 PSMB1P20618 241 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 BGNP21810 368 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 TUBG1P23258 451 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 CMA1P23946 247 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 ZBTB25P24278 435 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 HLA-DMAP28067 261 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 GNRHRP30968 328 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 CCR7P32248 378 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 EPHX2P34913 555 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 AQP2P41181 271 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 QARSP47897 775 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 UQCRFS1P47985 274 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 DUSP3P51452 185 aaPredicted RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 TPMTP51580 245 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 AKR1D1P51857 326 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 BIDP55957 195 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 MLF1P58340 268 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 NAA20P61599 178 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 KCNJ2P63252 427 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 PSPHP78330 225 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 BTN3A2P78410 334 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms