RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 PITX2Q99697 317 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 NDEL1Q9GZM8 345 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 IL20Q9NYY1 176 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 IER3IP1Q9Y5U9 82 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 SNX5Q9Y5X3 404 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 IGHV3OR15-7A0A075B7D8 119 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 A0A0G2JND7 137 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 LOC100653049A0A140TA62 436 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 A0A1B0GVI7 797 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 A0A1W2PRD5 423 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 A0A1W2PRF3 423 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 A0A1W2PRM7 423 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 ANKRD61A6NGH8 418 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 A6NLC8 198 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 MRASO14807 208 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 PIN1P1O15428 100 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 KRT34O76011 436 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 PTBP3O95758 552 aaKnown RBP6.07□□□□□ -1.44
CSDE1-206ENST00000483030 SCGB1D2O95969 90 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 NPPAP01160 153 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 PF4P02776 101 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 OPN1MWP04001 364 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 GRPP07492 148 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 FBP1P09467 338 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 OPN1MW2P0DN77 364 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 OPN1MW3P0DN78 364 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 CRABP1P29762 137 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 S100A5P33763 92 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 GGT2P36268 569 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 MDH1P40925 334 aaKnown RBP6.07□□□□□ -1.44
CSDE1-206ENST00000483030 ELF3P78545 371 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-206ENST00000483030 TRAP1Q12931 704 aaKnown RBP6.07□□□□□ -1.44
CSDE1-206ENST00000483030 ECH1Q13011 328 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 RCN1Q15293 331 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 KRTAP27-1Q3LI81 207 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 KPRPQ5T749 579 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-206ENST00000483030 SAMD5Q5TGI4 173 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 METTL21CQ5VZV1 264 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 PGM2L1Q6PCE3 622 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 CFAP77Q6ZQR2 320 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 Q6ZTK2 550 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 MRPL21Q7Z2W9 205 aaKnown RBP6.07□□□□□ -1.44
CSDE1-206ENST00000483030 ADCK1Q86TW2 530 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 FAM90A1Q86YD7 464 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 LINC00346Q8IVM7 164 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 FGFRL1Q8N441 504 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 C11orf44Q8N8P7 122 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 STON2Q8WXE9 905 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 ST8SIA4Q92187 359 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 FAM46AQ96IP4 442 aaKnown RBP6.07□□□□□ -1.44
CSDE1-206ENST00000483030 ATF6BQ99941 703 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 SLC22A4Q9H015 551 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 PPA2Q9H2U2 334 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 NRIP3Q9NQ35 241 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 TRIM36Q9NQ86 728 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 C1orf123Q9NWV4 160 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 GMPR2Q9P2T1 348 aaKnown RBP6.07□□□□□ -1.44
CSDE1-206ENST00000483030 ONECUT1Q9UBC0 465 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 DNAJB11Q9UBS4 358 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 RPUSD1Q9UJJ7 312 aaKnown RBP6.07□□□□□ -1.44
CSDE1-206ENST00000483030 VPREB3Q9UKI3 123 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 GTF2A1LQ9UNN4 478 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 B9D1Q9UPM9 204 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 SIGLEC7Q9Y286 467 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 TMEM5Q9Y2B1 443 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 SIGLEC9Q9Y336 463 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 CAB39Q9Y376 341 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-206ENST00000483030 NOP16Q9Y3C1 178 aaKnown RBP6.07□□□□□ -1.44
CSDE1-206ENST00000483030 KPTNQ9Y664 436 aa6.07□□□□□ -1.44
CSDE1-206ENST00000483030 NBEAL2Q6ZNJ1 2754 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 IGLV1-36A0A0B4J1U3 117 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 A0A1B0GW55 424 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 hCG_1807616A0A1W2PRN6 198 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 GGT3PA6NGU5 568 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 FAM220BPB1ANY3 271 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 NPFFO15130 113 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 GMDSO60547 372 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 PPP1R3DO95685 299 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 ZNF682O95780 498 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 TXNDC12O95881 172 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 PAHP00439 452 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 LHBP01229 141 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 DUX4L2P0CJ85 424 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 DUX4L3P0CJ86 424 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 DUX4L4P0CJ87 422 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 DUX4L5P0CJ88 424 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 DUX4L6P0CJ89 424 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 DUX4L7P0CJ90 424 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 EEF1B2P24534 225 aaKnown RBP6.06□□□□□ -1.44
CSDE1-206ENST00000483030 GABRA5P31644 462 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 DLX1P56177 255 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 TPTEP56180 551 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 FXYD6P3P58550 94 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 ZNF92Q03936 586 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 HERPUD1Q15011 391 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 IFI44LQ53G44 452 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 COQ5Q5HYK3 327 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 SLC18B1Q6NT16 456 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 DNM1P34Q6PK57 102 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 DUX4L9Q6RFH8 374 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms