RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 PITPNAQ00169 270 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 GLO1Q04760 184 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 STX5Q13190 355 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 EIF2B1Q14232 305 aaKnown RBP2.66□□□□□ -1.98
SMC6-208ENST00000481708 SUMO4Q6EEV6 95 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 IGFL3Q6UXB1 125 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 ZNF680Q8NEM1 530 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 SPPL2BQ8TCT7 592 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 FAM222BQ8WU58 562 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 SLC35B4Q969S0 331 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 NABP1Q96AH0 204 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 RNF126Q9BV68 326 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 KRTAP9-4Q9BYQ2 154 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 NHEJ1Q9H9Q4 299 aaPredicted RBP2.66□□□□□ -1.98
SMC6-208ENST00000481708 IL36RNQ9UBH0 155 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 WARS2Q9UGM6 360 aaKnown RBP2.66□□□□□ -1.98
SMC6-208ENST00000481708 GVINP1Q7Z2Y8 2422 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 A0A1B0GU03 582 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 A0A1W2PRF3 423 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 A0A1W2PRM7 423 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 OR5B21A6NL26 309 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 E7ESA3 106 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 F5H5T6 163 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 SLC1A7O00341 560 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 IGHV4-39P01824 125 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 ZNF35P13682 527 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 GNRHRP30968 328 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 CEACAM6P40199 344 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 APOC4P55056 127 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 FBXW4P57775 412 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 LMO4P61968 165 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 OR5I1Q13606 314 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 WDR38Q5JTN6 314 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 LINC00242Q5T6M2 205 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 SYPL2Q5VXT5 272 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 RFWD3Q6PCD5 774 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 WDR31Q8NA23 367 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 ZSCAN4Q8NAM6 433 aaPredicted RBP2.66□□□□□ -1.98
SMC6-208ENST00000481708 OR51A7Q8NH64 312 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 DTD1Q8TEA8 209 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 DDB2Q92466 427 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 REEP4Q9H6H4 257 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 UGT1A7Q9HAW7 530 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 COQ4Q9Y3A0 265 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 FBXO7Q9Y3I1 522 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 L3MBTL1Q9Y468 752 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 GMPPBQ9Y5P6 360 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 TRPM6Q9BX84 2022 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 OTOGLQ3ZCN5 2332 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 TRAV8-7A0A075B6U6 113 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 KRTAP4-8A0A0G2JLE6 195 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 MPZL2O60487 215 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 UGT1A9O60656 530 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 PTTG1O95997 202 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 RPLP0P05388 317 aaKnown RBP2.66□□□□□ -1.98
SMC6-208ENST00000481708 IGHV4-38-2P0DP08 117 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 HSD11B1P28845 292 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 SNAP25P60880 206 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 TSPAN31Q12999 210 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 ZIC1Q15915 447 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 PSMD5Q16401 504 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 CALCRLQ16602 461 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 NSUN5P1Q3KNT7 163 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 RFTN2Q52LD8 501 aaPredicted RBP2.66□□□□□ -1.98
SMC6-208ENST00000481708 TFDP3Q5H9I0 405 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 HHATQ5VTY9 493 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 ZNF788Q6ZQV5 615 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 FAM71AQ8IYT1 594 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 ZNF564Q8TBZ8 553 aaPredicted RBP2.66□□□□□ -1.98
SMC6-208ENST00000481708 RORBQ92753 470 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 DNAJC19Q96DA6 116 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 OR8B4Q96RC9 309 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 FAM173AQ9BQD7 235 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 TMEM9BQ9NQ34 198 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 ZC4H2Q9NQZ6 224 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 INIPQ9NRY2 104 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 ZFYVE26Q68DK2 2539 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 DOCK7Q96N67 2140 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 GOLGA6L10A6NI86 522 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 K7EQG2 157 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 LIN7AO14910 233 aaPredicted RBP2.65□□□□□ -1.98
SMC6-208ENST00000481708 HAT1O14929 419 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 MRPS12O15235 138 aaKnown RBP2.65□□□□□ -1.98
SMC6-208ENST00000481708 ENSAO43768 121 aaKnown RBP2.65□□□□□ -1.98
SMC6-208ENST00000481708 NXPH4O95158 308 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 GSTA1P08263 222 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 OR9G9P0C7N8 305 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 PVRP15151 417 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 CA6P23280 308 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 IGFBP5P24593 272 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 CALML3P27482 149 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 OR1D4P47884 311 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 CLDN6P56747 220 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 ABCE1P61221 599 aaKnown RBP2.65□□□□□ -1.98
SMC6-208ENST00000481708 IFFO1Q0D2I5 559 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 RUNX3Q13761 415 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 C9orf57Q5W0N0 161 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 SPOPLQ6IQ16 392 aa2.65□□□□□ -1.98
SMC6-208ENST00000481708 ADAM5Q6NVV9 412 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms