RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 CSNK2BP67870 215 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 ACTC1P68032 377 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 ACTA1P68133 377 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 SLC35A2P78381 396 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 AGAP6Q5VW22 663 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 SHEQ5VZ18 495 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 XAF1Q6GPH4 301 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 OR2T2Q6IF00 324 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 Q6ZR03 302 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 KCTD20Q7Z5Y7 419 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 CIARTQ8N365 385 aaPredicted RBP10.44□□□□□ -0.74
TRA2B-212ENST00000480461 YIPF7Q8N8F6 280 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 ZNF540Q8NDQ6 660 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 SPSB4Q96A44 273 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 C4orf36Q96KX1 117 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 ALG8Q9BVK2 526 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 PBOV1Q9GZY1 135 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 PPP1R3EQ9H7J1 279 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 NIPAL2Q9H841 368 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 ACOXLQ9NUZ1 547 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 FRRS1LQ9P0K9 344 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 TAAR3PQ9P1P4 343 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 GNG8Q9UK08 70 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 SIRT4Q9Y6E7 314 aaPredicted RBP10.44□□□□□ -0.74
TRA2B-212ENST00000480461 R4GMQ9 66 aa10.44□□□□□ -0.74
TRA2B-212ENST00000480461 A0A1B0GTI1 187 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 J3QW42 95 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 TBX1O43435 398 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 LALBAP00709 142 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 IGLV3-1P01715 115 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 TTRP02766 147 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 KRT8P05787 483 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 CDK1P06493 297 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 CCDC159P0C7I6 412 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 NAT2P11245 290 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 RAC2P15153 192 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 KITLGP21583 273 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 TUBG1P23258 451 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 RBMXP38159 391 aaKnown RBP10.43□□□□□ -0.74
TRA2B-212ENST00000480461 KIR3DL2P43630 455 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 GTF2A1P52655 376 aaPredicted RBP10.43□□□□□ -0.74
TRA2B-212ENST00000480461 KLF3P57682 345 aaPredicted RBP10.43□□□□□ -0.74
TRA2B-212ENST00000480461 RPS23P62266 143 aaKnown RBP10.43□□□□□ -0.74
TRA2B-212ENST00000480461 FAM3AP98173 230 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 SPRNQ5BIV9 151 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 CATSPERDQ86XM0 798 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 C1orf174Q8IYL3 243 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 ELMOD2Q8IZ81 293 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 RDH10Q8IZV5 341 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 ZNF786Q8N393 782 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 OR5L1Q8NGL2 311 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 PGAM5Q96HS1 289 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 CACNG6Q9BXT2 260 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 TUBG2Q9NRH3 451 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 INPP5EQ9NRR6 644 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 ZNF701Q9NV72 531 aaPredicted RBP10.43□□□□□ -0.74
TRA2B-212ENST00000480461 BEX4Q9NWD9 120 aaPredicted RBP10.43□□□□□ -0.74
TRA2B-212ENST00000480461 PURGQ9UJV8 347 aaKnown RBP10.43□□□□□ -0.74
TRA2B-212ENST00000480461 OR52A1Q9UKL2 312 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 CUBNO60494 3623 aa10.43□□□□□ -0.74
TRA2B-212ENST00000480461 DSCAMO60469 2012 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 ZSCAN5BA6NJL1 495 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 ACOD1A6NK06 481 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 VSTM5A8MXK1 200 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 H7C1Q1 480 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 LY6HO94772 140 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 APOC1P02654 83 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 GCH1P30793 250 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 HNRNPA0Q13151 305 aaKnown RBP10.42□□□□□ -0.74
TRA2B-212ENST00000480461 IRF3Q14653 427 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 WDR38Q5JTN6 314 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 FDX2Q6P4F2 183 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 UNQ6126/PRO20091Q6UXV3 157 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 OR5AS1Q8N127 324 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 SYS1Q8N2H4 156 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 NANOGP1Q8N7R0 232 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 OR52H1Q8NGJ2 320 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 OR2G2Q8NGZ5 317 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 OR51E1Q8TCB6 317 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 SPRYD4Q8WW59 207 aaPredicted RBP10.42□□□□□ -0.74
TRA2B-212ENST00000480461 GATAD2BQ8WXI9 593 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 REEP6Q96HR9 211 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 CCL19Q99731 98 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 CDCA4Q9BXL8 241 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 MSL2Q9HCI7 577 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 FAIMQ9NVQ4 179 aa10.42□□□□□ -0.74
TRA2B-212ENST00000480461 NUFIP1Q9UHK0 495 aaKnown RBP10.42□□□□□ -0.74
TRA2B-212ENST00000480461 A0A0U1RQV5 110 aa10.41□□□□□ -0.74
TRA2B-212ENST00000480461 hCG_38984A0A1B0GV85 526 aa10.41□□□□□ -0.74
TRA2B-212ENST00000480461 IRGMA1A4Y4 181 aa10.41□□□□□ -0.74
TRA2B-212ENST00000480461 CD300LBA8K4G0 201 aa10.41□□□□□ -0.74
TRA2B-212ENST00000480461 LOC110117498-PIK3R3F6TDL0 507 aa10.41□□□□□ -0.74
TRA2B-212ENST00000480461 H0YL77 283 aa10.41□□□□□ -0.74
TRA2B-212ENST00000480461 H3BSA7 217 aa10.41□□□□□ -0.74
TRA2B-212ENST00000480461 MT-ND2P03891 347 aa10.41□□□□□ -0.74
TRA2B-212ENST00000480461 TACSTD2P09758 323 aa10.41□□□□□ -0.74
TRA2B-212ENST00000480461 PAX1P15863 534 aa10.41□□□□□ -0.74
TRA2B-212ENST00000480461 ACKR3P25106 362 aa10.41□□□□□ -0.74
TRA2B-212ENST00000480461 GSK3AP49840 483 aa10.41□□□□□ -0.74
TRA2B-212ENST00000480461 MALLQ13021 153 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms