RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 IGFN1Q86VF2 1251 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 SPATA24Q86W54 205 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF101Q8IZC7 436 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 LRRC18Q8N456 261 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 FTMTQ8N4E7 242 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 SLC37A3Q8NCC5 494 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 PROKR2Q8NFJ6 384 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 OR9Q2Q8NGE9 314 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 OR8D4Q8NGM9 314 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 OR8J1Q8NGP2 316 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 OR2AJ1Q8NGZ0 328 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 OR13G1Q8NGZ3 307 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 OR4K13Q8NH42 304 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 IL17DQ8TAD2 202 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 HAVCR2Q8TDQ0 301 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 ST7LQ8TDW4 575 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 ASB17Q8WXJ9 295 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 NSMAFQ92636 917 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 SPTSSAQ969W0 71 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF503Q96F45 646 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 PERPQ96FX8 193 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 ATF6BQ99941 703 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 NIPSNAP1Q9BPW8 284 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 RBM4BQ9BQ04 359 aaKnown RBP4.16□□□□□ -1.74
PTCD3-213ENST00000480102 SLC30A2Q9BRI3 323 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 TSSK6Q9BXA6 273 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 C1QTNF6Q9BXI9 259 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 PLA2G12AQ9BZM1 189 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 YIPF3Q9GZM5 350 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 DYNLRB1Q9NP97 96 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 RPRD1BQ9NQG5 326 aaKnown RBP4.16□□□□□ -1.74
PTCD3-213ENST00000480102 PAPOLBQ9NRJ5 636 aaKnown RBP4.16□□□□□ -1.74
PTCD3-213ENST00000480102 TBC1D23Q9NUY8 699 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 MRPL22Q9NWU5 206 aaKnown RBP4.16□□□□□ -1.74
PTCD3-213ENST00000480102 VNN3Q9NY84 501 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 MRPL15Q9P015 296 aaKnown RBP4.16□□□□□ -1.74
PTCD3-213ENST00000480102 PDP1Q9P0J1 537 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-213ENST00000480102 ITGB1BP2Q9UKP3 347 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 COMMD3-BMI1R4GMX3 469 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 HIVEP2P31629 2446 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 AKAP6Q13023 2319 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 PLCE1Q9P212 2302 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 SETD2Q9BYW2 2564 aaPredicted RBP4.15□□□□□ -1.74
PTCD3-213ENST00000480102 TEP1Q99973 2627 aaKnown RBP4.15□□□□□ -1.74
PTCD3-213ENST00000480102 NIPBLQ6KC79 2804 aaeCLIP4.15□□□□□ -1.74
PTCD3-213ENST00000480102 CACNA1DQ01668 2161 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 IGHV4-30-2A0A087WSY4 118 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 A0A0U1RQV5 110 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 A0A1W2PPL8 197 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 ZAR1LA6NP61 321 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 A8MXK9 166 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF878C9JN71 531 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 M0R135 149 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 SOCS2O14508 198 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 PHYHO14832 338 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 RER1O15258 196 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 XRCC2O43543 280 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 GPRIN2O60269 458 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 MPZL2O60487 215 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 DOK2O60496 412 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 GMDSO60547 372 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 CRLF1O75462 422 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 TIPRLO75663 272 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 CIB2O75838 187 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 SEC14L2O76054 403 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 FSHBP01225 129 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 ALPLP05186 524 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 ADRA2AP08913 450 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 ACSM4P0C7M7 580 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 ALOX5APP20292 161 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 SLC2A5P22732 501 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 TNFSF4P23510 183 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 CDKN1AP38936 164 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 OPRL1P41146 370 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 HTR5AP47898 357 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF81P51508 661 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 TUBA1BP68363 451 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 TUBA4AP68366 448 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 PSG7Q13046 419 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 CCNIQ14094 377 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM249Q2WGJ8 235 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM155Q4W5P6 130 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 FAM76BQ5HYJ3 339 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 CLEC12AQ5QGZ9 265 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 C6orf52Q5T4I8 152 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 LCN1P1Q5VSP4 162 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 AADACL4Q5VUY2 407 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 MEDAGQ5VYS4 303 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 C12orf73Q69YU5 71 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 CYB5R2Q6BCY4 276 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 KRT80Q6KB66 452 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF774Q6NX45 483 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 KCTD18Q6PI47 426 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-213ENST00000480102 TUBA1AQ71U36 451 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 KCTD20Q7Z5Y7 419 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 GID4Q8IVV7 300 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 PAQR4Q8N4S7 273 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF283Q8N7M2 679 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 ATG16L2Q8NAA4 619 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 CYB561A3Q8NBI2 242 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms