RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 MAGEB3O15480 346 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 XRCC3O43542 346 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 LMX1BO60663 402 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 SCGNO76038 276 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 BPNT1O95861 308 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 IL18BPO95998 194 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 LCATP04180 440 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 SERPINA5P05154 406 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 DBHP09172 617 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 UBBP0CG47 229 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 ARSBP15848 533 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 CLDN12P56749 244 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 PLP2Q04941 152 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 SPOCK1Q08629 439 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 TMEM69Q5SWH9 247 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 FAM180AQ6UWF9 173 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 PLXDC2Q6UX71 529 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 DNM1P46Q6ZS02 220 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 OR2W3Q7Z3T1 314 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 NAA40Q86UY6 237 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 OR5AS1Q8N127 324 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 JAGN1Q8N5M9 183 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 SEMA6DQ8NFY4 1073 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 OR51D1Q8NGF3 324 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 OR13C9Q8NGT0 318 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 SSC4DQ8WTU2 575 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 DEDD2Q8WXF8 326 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 ITPKCQ96DU7 683 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 CPNE2Q96FN4 548 aaPredicted RBP9.6□□□□□ -0.87
VTI1A-204ENST00000480057 ZFP3Q96NJ6 502 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 TECTBQ96PL2 329 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 C7orf50Q9BRJ6 194 aaKnown RBP9.6□□□□□ -0.87
VTI1A-204ENST00000480057 NUDT16L1Q9BRJ7 211 aaKnown RBP9.6□□□□□ -0.87
VTI1A-204ENST00000480057 OPA3Q9H6K4 179 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 DIABLOQ9NR28 239 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 GHRLQ9UBU3 117 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 ARHGAP21Q5T5U3 1957 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 PTPRZ1P23471 2315 aaPredicted RBP9.6□□□□□ -0.87
VTI1A-204ENST00000480057 TMEM272A0A1B0GTI8 110 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 E9PLN8 166 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 PLA2G10O15496 165 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 CTAG2O75638 210 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 ECDO95905 644 aaPredicted RBP9.59□□□□□ -0.87
VTI1A-204ENST00000480057 PATE4P0C8F1 98 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 ABOP16442 354 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 ZNF93P35789 620 aaPredicted RBP9.59□□□□□ -0.87
VTI1A-204ENST00000480057 ALDH3B1P43353 468 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 MAP2K3P46734 347 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 RFX2P48378 723 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 PTH2RP49190 550 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 GSK3AP49840 483 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 RIPPLY1Q0D2K3 151 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 SNAI3Q3KNW1 292 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 PLEKHN1Q494U1 663 aaPredicted RBP9.59□□□□□ -0.87
VTI1A-204ENST00000480057 SFRP5Q5T4F7 317 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 C1QTNF12Q5T7M4 302 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 ZNF324BQ6AW86 544 aaPredicted RBP9.59□□□□□ -0.87
VTI1A-204ENST00000480057 CCBE1Q6UXH8 406 aaPredicted RBP9.59□□□□□ -0.87
VTI1A-204ENST00000480057 Q6ZT83 130 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 KRT74Q7RTS7 529 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 C9orf106Q8NAJ2 232 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 OR52N4Q8NGI2 321 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 SLC7A6Q92536 515 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 YIPF5Q969M3 257 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 PHF21AQ96BD5 680 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 SPSB1Q96BD6 273 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 ABHD17AQ96GS6 310 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 REEP6Q96HR9 211 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 C12orf49Q9H741 205 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 CNTD2Q9H8S5 307 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 PLSCR4Q9NRQ2 329 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 RBFOX1Q9NWB1 397 aaKnown RBP9.59□□□□□ -0.87
VTI1A-204ENST00000480057 B3GNT2Q9NY97 397 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 TUBD1Q9UJT1 453 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 RAB22AQ9UL26 194 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 N6AMT1Q9Y5N5 214 aa9.59□□□□□ -0.87
VTI1A-204ENST00000480057 hCG_38984A0A1B0GV85 526 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 CIB4A0PJX0 185 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 FUOMA2VDF0 154 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 GGT3PA6NGU5 568 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 FIGNL2A6NMB9 653 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 SULT1C2O00338 296 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 LYRM1O43325 122 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 HLA-HP01893 362 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 ADRB1P08588 477 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 COX5AP20674 150 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 PRKACBP22694 351 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 CDK2P24941 298 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 STOMP27105 288 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 KIR2DL2P43627 348 aaPredicted RBP9.58□□□□□ -0.88
VTI1A-204ENST00000480057 BCAP31P51572 246 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 FOXG1P55316 489 aaPredicted RBP9.58□□□□□ -0.88
VTI1A-204ENST00000480057 TAS2R20P59543 309 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 AP3S2P59780 193 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 RAB1AP62820 205 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 HGFACQ04756 655 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 SSBP1Q04837 148 aaKnown RBP9.58□□□□□ -0.88
VTI1A-204ENST00000480057 DYRK1AQ13627 763 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 CNN3Q15417 329 aaKnown RBP9.58□□□□□ -0.88
VTI1A-204ENST00000480057 OR8B8Q15620 311 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms