RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	NIPAL2	Q9H841	368 aa		13.19	□□□□□ -0.3
HDLBP-238	ENST00000479894	CDH20	Q9HBT6	801 aa		13.19	□□□□□ -0.3
HDLBP-238	ENST00000479894	MRPL22	Q9NWU5	206 aa	Known RBP	13.19	□□□□□ -0.3
HDLBP-238	ENST00000479894	DNAJC27	Q9NZQ0	273 aa		13.19	□□□□□ -0.3
HDLBP-238	ENST00000479894	LAMP5	Q9UJQ1	280 aa		13.19	□□□□□ -0.3
HDLBP-238	ENST00000479894	LHFPL6	Q9Y693	200 aa		13.19	□□□□□ -0.3
HDLBP-238	ENST00000479894	ZNF670-ZNF695	F2Z2N8	137 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894		J3QW42	95 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894		M0QZ24	198 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	DOK2	O60496	412 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	LYN	P07948	512 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	ZNF14	P17017	642 aa	Predicted RBP	13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	MDK	P21741	143 aa	Predicted RBP	13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	NR4A1	P22736	598 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	STOM	P27105	288 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	RGS6	P49758	472 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	CXCR4	P61073	352 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	RPS23	P62266	143 aa	Known RBP	13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	GRB2	P62993	217 aa	Known RBP	13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	BAMBI	Q13145	260 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	EIF2B1	Q14232	305 aa	Known RBP	13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	RAB39A	Q14964	217 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	DEGS2	Q6QHC5	323 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	DPY19L4	Q7Z388	723 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	OR1F12	Q8NHA8	337 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	OTOS	Q8NHW6	89 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	DUX5	Q96PT3	197 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	ATF6B	Q99941	703 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	ELOVL3	Q9HB03	270 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	INPP5E	Q9NRR6	644 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	SCN3B	Q9NY72	215 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	ZNF224	Q9NZL3	707 aa		13.18	□□□□□ -0.3
HDLBP-238	ENST00000479894	PPIAL4E	A0A075B759	164 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	PPIAL4C	A0A0B4J2A2	164 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	CCDC182	A6NF36	153 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	EFCAB10	A6NFE3	127 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	ZNF878	C9JN71	531 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	PPIAL4D	F5H284	164 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894		M0R129	80 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	ZNF254	O75437	659 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	IGHV2-5	P01817	119 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	SCG5	P05408	212 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	SBK2	P0C263	348 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	PPIAL4F	P0DN26	164 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	MYF6	P23409	242 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	GLRX	P35754	106 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	RAD52	P43351	418 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	HTR5A	P47898	357 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	MEP1B	Q16820	701 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	MSMP	Q1L6U9	139 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	VASH1	Q7L8A9	365 aa	Predicted RBP	13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	DCXR	Q7Z4W1	244 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	OR51G2	Q8NGK0	314 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	HAVCR2	Q8TDQ0	301 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	UBE2F	Q969M7	185 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	RNFT2	Q96EX2	444 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	MRO	Q9BYG7	248 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	MRPS18A	Q9NVS2	196 aa	Known RBP	13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	CHCHD3	Q9NX63	227 aa	Known RBP	13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	NUP50	Q9UKX7	468 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	BLOC1S6	Q9UL45	172 aa		13.17	□□□□□ -0.3
HDLBP-238	ENST00000479894	TIMM23	O14925	209 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	RER1	O15258	196 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	NCR1	O76036	304 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	PATE4	P0C8F1	98 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	NAA10	P41227	235 aa	Predicted RBP	13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	TPTE	P56180	551 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	EGR3	Q06889	387 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	CDK5R2	Q13319	367 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	ZNF774	Q6NX45	483 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	KCTD20	Q7Z5Y7	419 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	LINC00346	Q8IVM7	164 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	SLC35F2	Q8IXU6	374 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	ACBD7	Q8N6N7	88 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	OR5L1	Q8NGL2	311 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	FBLIM1	Q8WUP2	373 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	THEM6	Q8WUY1	208 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	ZNRF4	Q8WWF5	429 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	WFDC12	Q8WWY7	111 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	TMIGD2	Q96BF3	282 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	SLAMF6	Q96DU3	332 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	BCL2L14	Q9BZR8	327 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	WNT5B	Q9H1J7	359 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	ADGRL4	Q9HBW9	690 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	PLCXD1	Q9NUJ7	323 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	TPRKB	Q9Y3C4	175 aa		13.16	□□□□□ -0.3
HDLBP-238	ENST00000479894	C5orf49	A4QMS7	147 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	DENR	O43583	198 aa	Known RBP	13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	SELENOF	O60613	162 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	CLIC3	O95833	236 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	GPANK1	O95872	356 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	GNAO1	P09471	354 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	H2BFM	P0C1H6	154 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	DBT	P11182	482 aa	Known RBP	13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	ALOX5AP	P20292	161 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	DCK	P27707	260 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	HSD11B1	P28845	292 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	ALDH3B1	P43353	468 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	SELENOV	P59797	346 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	CORO6	Q6QEF8	472 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms