RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 TMEM246Q9BRR3 403 aa12.62□□□□□ -0.39
PRKN-207ENST00000479615 RGCCQ9H4X1 137 aa12.62□□□□□ -0.39
PRKN-207ENST00000479615 MARCH7Q9H992 704 aa12.62□□□□□ -0.39
PRKN-207ENST00000479615 ZMAT3Q9HA38 289 aaKnown RBP12.62□□□□□ -0.39
PRKN-207ENST00000479615 MMP26Q9NRE1 261 aa12.62□□□□□ -0.39
PRKN-207ENST00000479615 PDP1Q9P0J1 537 aaPredicted RBP12.62□□□□□ -0.39
PRKN-207ENST00000479615 RNF7Q9UBF6 113 aa12.62□□□□□ -0.39
PRKN-207ENST00000479615 ANKRD30BLA7E2S9 258 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 TRAPPC2LH3BP13 241 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 PHYHO14832 338 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 GYPBP06028 91 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 OSMP13725 252 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 CA6P23280 308 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 RPS27P42677 84 aaKnown RBP12.61□□□□□ -0.39
PRKN-207ENST00000479615 COMPP49747 757 aaPredicted RBP12.61□□□□□ -0.39
PRKN-207ENST00000479615 PRKXP51817 358 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 PAX8Q06710 450 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 EIF2B1Q14232 305 aaKnown RBP12.61□□□□□ -0.39
PRKN-207ENST00000479615 FLOT2Q14254 428 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 SNAI3Q3KNW1 292 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 GLYATL3Q5SZD4 288 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 LINC01590Q5TEZ4 76 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 CD276Q5ZPR3 534 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 BCAS4Q8TDM0 211 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 RAB40AQ8WXH6 277 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 NRBF2Q96F24 287 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 ADAT1Q9BUB4 502 aaKnown RBP12.61□□□□□ -0.39
PRKN-207ENST00000479615 CLN8Q9UBY8 286 aa12.61□□□□□ -0.39
PRKN-207ENST00000479615 TRAV38-1A0A0B4J264 116 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 KIR2DS1A0A191URI9 304 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 PRR23D1E9PI22 279 aaPredicted RBP12.6□□□□□ -0.39
PRKN-207ENST00000479615 PRODHO43272 600 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 TIPRLO75663 272 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 LIPFP07098 398 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 PRR23D2P0DMB1 279 aaPredicted RBP12.6□□□□□ -0.39
PRKN-207ENST00000479615 PITPNBP48739 271 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 BPIFB3P59826 476 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 ACTG1P63261 375 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 DBPQ10586 325 aaPredicted RBP12.6□□□□□ -0.39
PRKN-207ENST00000479615 TIGD6Q17RP2 521 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 SLC35D3Q5M8T2 416 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 DPY19L4Q7Z388 723 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 SPATA24Q86W54 205 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.6□□□□□ -0.39
PRKN-207ENST00000479615 ERI1Q8IV48 349 aaKnown RBP12.6□□□□□ -0.39
PRKN-207ENST00000479615 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.6□□□□□ -0.39
PRKN-207ENST00000479615 PAPD5Q8NDF8 572 aaKnown RBP12.6□□□□□ -0.39
PRKN-207ENST00000479615 OR6N2Q8NGY6 317 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 DVL3Q92997 716 aaPredicted RBP12.6□□□□□ -0.39
PRKN-207ENST00000479615 OTULINQ96BN8 352 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 CLPTM1LQ96KA5 538 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 ABHD6Q9BV23 337 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 NIPAL2Q9H841 368 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 ABCB9Q9NP78 766 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 DNAJB9Q9UBS3 223 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 ZNF391Q9UJN7 358 aa12.6□□□□□ -0.39
PRKN-207ENST00000479615 WNK2Q9Y3S1 2297 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 IGHV2-70DA0A0C4DH43 119 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 TMEM89A2RUT3 159 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 LGALS8O00214 317 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 FAM20BO75063 409 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 DNAJC8O75937 253 aaPredicted RBP12.59□□□□□ -0.39
PRKN-207ENST00000479615 ANXA2P07355 339 aaKnown RBP12.59□□□□□ -0.39
PRKN-207ENST00000479615 CLUP10909 449 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 POU1F1P28069 291 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 PSMB10P40306 273 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 PMELP40967 661 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 MTNR1AP48039 350 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 CX3CR1P49238 355 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 RASSF2P50749 326 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 SEC61A1P61619 476 aaKnown RBP12.59□□□□□ -0.39
PRKN-207ENST00000479615 CDK5Q00535 292 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 PAX2Q02962 417 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 GINS1Q14691 196 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 TUSC1Q2TAM9 212 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 LYPD4Q6UWN0 246 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 TIGD4Q8IY51 512 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 CSNK2A3Q8NEV1 391 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 OR2AE1Q8NHA4 323 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 GCDHQ92947 438 aaPredicted RBP12.59□□□□□ -0.39
PRKN-207ENST00000479615 SLC6A7Q99884 636 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 OR10A2Q9H208 303 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 ERVK-18Q9QC07 812 aa12.59□□□□□ -0.39
PRKN-207ENST00000479615 TCRBV3S1A0A5B6 114 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 FAM183AA6NL82 134 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 TBX1O43435 398 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 ZNF205O95201 554 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 LYNP07948 512 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 H2BFMP0C1H6 154 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 CD80P33681 288 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 OPRL1P41146 370 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 CBX1P83916 185 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 MPPED2Q15777 294 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 C9orf139Q6ZV77 190 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 DOK3Q7L591 496 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 SLC16A9Q7RTY1 509 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 OR56B2PQ8NGI1 322 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 OR8S1Q8NH09 359 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 OTOSQ8NHW6 89 aa12.58□□□□□ -0.4
PRKN-207ENST00000479615 UPRTQ96BW1 309 aa12.58□□□□□ -0.4
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