RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 FAM199XQ6PEV8 388 aaPredicted RBP12.88□□□□□ -0.35
COL20A1-206ENST00000479501 FJX1Q86VR8 437 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 BAP18Q8IXM2 172 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 OR10G3Q8NGC4 313 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 SGK3Q96BR1 496 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 TP53TG5Q9Y2B4 290 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 C4orf51C9J302 202 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 KLRC4-KLRK1H3BQV0 150 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 CXCL13O43927 109 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 MT-CO2P00403 227 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 GUSBP08236 651 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 RD3LP0DJH9 198 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 MGMTP16455 207 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 EPHA8P29322 1005 aaPredicted RBP12.88□□□□□ -0.35
COL20A1-206ENST00000479501 SLC37A1P57057 533 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 FMODQ06828 376 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 ZNF266Q14584 549 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 ATG4DQ86TL0 474 aaPredicted RBP12.88□□□□□ -0.35
COL20A1-206ENST00000479501 CMTM3Q96MX0 182 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 PATZ1Q9HBE1 687 aaKnown RBP12.88□□□□□ -0.35
COL20A1-206ENST00000479501 ICAM5Q9UMF0 924 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 A0A1B0GTH9 108 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 EPOPA6NHQ4 379 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 HSBP1L1C9JCN9 74 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 RGS13O14921 159 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 FOSL1P15407 271 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 RRADP55042 308 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 C1QL3Q5VWW1 255 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 NAA40Q86UY6 237 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 NDRG3Q9UGV2 375 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 TDRD6O60522 2096 aaKnown RBP12.88□□□□□ -0.35
COL20A1-206ENST00000479501 FAM166BA8MTA8 275 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 DHHO43323 396 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 ANKRD37Q7Z713 158 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 SLC22A18ASQ8N1D0 253 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 NPEPL1Q8NDH3 523 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 NUDCD2Q8WVJ2 157 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 MYOTQ9UBF9 498 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 DTX4Q9Y2E6 619 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 PRELID3BQ9Y3B1 194 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 MCRIP1C9JLW8 97 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 CBR3O75828 277 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 BCKDHBP21953 392 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 PDZD11Q5EBL8 140 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 MAMSTRQ6ZN01 415 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 ABHD1Q96SE0 405 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 SPACA1Q9HBV2 294 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 LOXL2Q9Y4K0 774 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 ALOX5APP20292 161 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 GALNSP34059 522 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 PCK2Q16822 640 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 RNF212Q495C1 297 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 PRSS35Q8N3Z0 413 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 CPNE4Q96A23 557 aaPredicted RBP12.87□□□□□ -0.35
COL20A1-206ENST00000479501 MIXL1Q9H2W2 232 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 SERTAD4Q9NUC0 356 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 IGHV3-15A0A0B4J1V0 119 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 BET1O15155 118 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 IFITM3Q01628 133 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 UCK1Q9HA47 277 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 PCDHGA5Q9Y5G8 931 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 V9GYH0 126 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 DSPPQ9NZW4 1301 aa12.87□□□□□ -0.35
COL20A1-206ENST00000479501 PTHLHP12272 177 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 CTLA4P16410 223 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 ACAA2P42765 397 aaKnown RBP12.86□□□□□ -0.35
COL20A1-206ENST00000479501 RFX2P48378 723 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 IKZF1Q13422 519 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 RBMS3Q6XE24 437 aaKnown RBP12.86□□□□□ -0.35
COL20A1-206ENST00000479501 OR4C16Q8NGL9 310 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 PTPMT1Q8WUK0 201 aaPredicted RBP12.86□□□□□ -0.35
COL20A1-206ENST00000479501 PRSS27Q9BQR3 290 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 GPR173Q9NS66 373 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 TPRP12270 2363 aaKnown RBP12.86□□□□□ -0.35
COL20A1-206ENST00000479501 OGG1O15527 345 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 ZP3P21754 424 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 IL11RAQ14626 422 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 PWWP2BQ6NUJ5 590 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 ZNF705AQ6ZN79 300 aaPredicted RBP12.86□□□□□ -0.35
COL20A1-206ENST00000479501 D2HGDHQ8N465 521 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 ZNF321PQ8N8H1 164 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 MARVELD1Q9BSK0 173 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 TWSG1Q9GZX9 223 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 OR2C1O95371 312 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 INHBBP09529 407 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 OR4E1P0C645 316 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 IL9P15248 144 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 CDAP32320 146 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 LINC00303Q3SY05 128 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 TMEM217Q8N7C4 229 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 APH1AQ96BI3 265 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 UPRTQ96BW1 309 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 DOCK6Q96HP0 2047 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 DOCK4Q8N1I0 1966 aa12.86□□□□□ -0.35
COL20A1-206ENST00000479501 JTBO76095 146 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 RBP2P50120 134 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 ZNF133P52736 654 aaPredicted RBP12.85□□□□□ -0.35
COL20A1-206ENST00000479501 ZNF121P58317 390 aaPredicted RBP12.85□□□□□ -0.35
COL20A1-206ENST00000479501 CST9LP1Q5W188 147 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 DGAT2L6Q6ZPD8 337 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms