RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 UPB1Q9UBR1 384 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 D6RAR5 112 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 ATP6V1G2-DDX39BF2Z307 99 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 RAD51DO75771 328 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 STK17BO94768 372 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 MPIG6BO95866 241 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 CD74P04233 296 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 CCL4P13236 92 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 RAB3AP20336 220 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 DLSTP36957 453 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 CLDN17P56750 224 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 PLAC9Q5JTB6 97 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 JMJD6Q6NYC1 403 aaPredicted RBP9.55□□□□□ -0.88
VPS52-217ENST00000478934 C1QL2Q7Z5L3 287 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 SLC51BQ86UW2 128 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 PPP1R3BQ86XI6 285 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 OR5AS1Q8N127 324 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 LRRC18Q8N456 261 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 OR5L2Q8NGL0 311 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 OR6K3Q8NGY3 331 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 MARCH1Q8TCQ1 289 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 SAP25Q8TEE9 199 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 UCN2Q96RP3 112 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 RAB22AQ9UL26 194 aa9.55□□□□□ -0.88
VPS52-217ENST00000478934 RNF222A6NCQ9 220 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 MPTX1A8MV57 137 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 PDGFBP01127 241 aaPredicted RBP9.54□□□□□ -0.88
VPS52-217ENST00000478934 IGHG1P01857 330 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 STARP49675 285 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 GABREP78334 506 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 THEM4Q5T1C6 240 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 DEGS2Q6QHC5 323 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 PXT1Q8NFP0 134 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 OR4K17Q8NGC6 315 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 OR2AJ1Q8NGZ0 328 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 RNF138Q8WVD3 245 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 FBXW5Q969U6 566 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 SPACA9Q96E40 222 aaPredicted RBP9.54□□□□□ -0.88
VPS52-217ENST00000478934 ZNF837Q96EG3 531 aaPredicted RBP9.54□□□□□ -0.88
VPS52-217ENST00000478934 SLC25A21Q9BQT8 299 aaPredicted RBP9.54□□□□□ -0.88
VPS52-217ENST00000478934 SCPEP1Q9HB40 452 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 PNRC2Q9NPJ4 139 aaKnown RBP9.54□□□□□ -0.88
VPS52-217ENST00000478934 IFT46Q9NQC8 304 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 PRDM6Q9NQX0 595 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 WNT16Q9UBV4 365 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 CHCHD2Q9Y6H1 151 aaPredicted RBP9.54□□□□□ -0.88
VPS52-217ENST00000478934 ADAMTS9Q9P2N4 1935 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 ZDBF2Q9HCK1 2354 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 IGKV1-9A0A0C4DH69 117 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 A0A1W2PNV4 684 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 OR5H15A6NDH6 313 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 METTL21EPA6NDL7 271 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 SULT2B1O00204 365 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 SULT1C2O00338 296 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 ZNF20P17024 532 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 ZNF43P17038 809 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 NAGAP17050 411 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 LYSMD4Q5XG99 296 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 C11orf87Q6NUJ2 197 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 SLC25A47Q6Q0C1 308 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 NAXDQ8IW45 347 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 SLC22A24Q8N4F4 322 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 OR5D14Q8NGL3 314 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 OR6S1Q8NH40 331 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 ZNF385AQ96PM9 386 aaKnown RBP9.54□□□□□ -0.88
VPS52-217ENST00000478934 ADAT1Q9BUB4 502 aaKnown RBP9.54□□□□□ -0.88
VPS52-217ENST00000478934 EDEM2Q9BV94 578 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 ZNF416Q9BWM5 594 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 LPAR5Q9H1C0 372 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 TAS2R3Q9NYW6 316 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 MBD2Q9UBB5 411 aa9.54□□□□□ -0.88
VPS52-217ENST00000478934 KANTRA0A1W2PQU2 76 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 C9orf170A2RU37 121 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 C5orf51A6NDU8 294 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 F5H5K5 113 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 DKK1O94907 266 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 WDPCPO95876 746 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 DBHP09172 617 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 CCL3P10147 92 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 ZBTB25P24278 435 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 CX3CR1P49238 355 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 NPY4RP50391 375 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 SUMO3P55854 103 aaPredicted RBP9.53□□□□□ -0.88
VPS52-217ENST00000478934 TMEM50BP56557 158 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 TOMM20Q15388 145 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 MPPED2Q15777 294 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 OVCH2Q7RTZ1 564 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 HDDC2Q7Z4H3 204 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 ZNF283Q8N7M2 679 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 NKAIN3Q8N8D7 197 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 MAFAQ8NHW3 353 aaPredicted RBP9.53□□□□□ -0.88
VPS52-217ENST00000478934 TMEM41AQ96HV5 264 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 C1orf147Q96MC9 270 aaPredicted RBP9.53□□□□□ -0.88
VPS52-217ENST00000478934 ALX4Q9H161 411 aaPredicted RBP9.53□□□□□ -0.88
VPS52-217ENST00000478934 COMMD9Q9P000 198 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 LHX6Q9UPM6 363 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 SIT1Q9Y3P8 196 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 ASPMQ8IZT6 3477 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 TUBAL3A6NHL2 446 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 FAM74A7A6NL05 159 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms