RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ONECUT1Q9UBC0 465 aa3.41□□□□□ -1.86
CCDC171-207ENST00000478913 RIMS3Q9UJD0 308 aa3.41□□□□□ -1.86
CCDC171-207ENST00000478913 STK38LQ9Y2H1 464 aa3.41□□□□□ -1.86
CCDC171-207ENST00000478913 MAB21L2Q9Y586 359 aa3.41□□□□□ -1.86
CCDC171-207ENST00000478913 TRGV5A0A0B4J1U4 118 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 IGHV7-81A0A0B4J1V7 117 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 PPIAL4CA0A0B4J2A2 164 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 LOC100131303A0A0U1RQF7 123 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 VSTM2BA6NLU5 285 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 MIF4GDA9UHW6 222 aaKnown RBP3.4□□□□□ -1.87
CCDC171-207ENST00000478913 FCN1O00602 326 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 EMC8O43402 210 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 CALUO43852 315 aaPredicted RBP3.4□□□□□ -1.87
CCDC171-207ENST00000478913 EFNA2O43921 213 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 OPN1LWP04000 364 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 MSMBP08118 114 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 PPIAL4GP0DN37 164 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 TROVE2P10155 538 aaKnown RBP eCLIP3.4□□□□□ -1.87
CCDC171-207ENST00000478913 KRT13P13646 458 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 DESP17661 470 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 PSMA2P25787 234 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 NDUFA9Q16795 377 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 PHYHD1Q5SRE7 291 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 SULT1C3Q6IMI6 304 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 ACSM5Q6NUN0 579 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 H3F3CQ6NXT2 135 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 H2AFVQ71UI9 128 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 TRMT10CQ7L0Y3 403 aaKnown RBP3.4□□□□□ -1.87
CCDC171-207ENST00000478913 NLRP9Q7RTR0 991 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 APTXQ7Z2E3 356 aaKnown RBP3.4□□□□□ -1.87
CCDC171-207ENST00000478913 DPY19L4Q7Z388 723 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 SPATA24Q86W54 205 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 SKA3Q8IX90 412 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 IQCF2Q8IXL9 164 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 ZNF100Q8IYN0 542 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 ST13P4Q8IZP2 240 aaPredicted RBP3.4□□□□□ -1.87
CCDC171-207ENST00000478913 TMEM251Q8N6I4 163 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 ZNF540Q8NDQ6 660 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 OR5B17Q8NGF7 314 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 FAM81AQ8TBF8 368 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 MCUR1Q96AQ8 359 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 PPP1R14BQ96C90 147 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 RPRD1AQ96P16 312 aaPredicted RBP3.4□□□□□ -1.87
CCDC171-207ENST00000478913 TTTY12Q9BZ98 90 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 ULBP1Q9BZM6 244 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 FGFR1OP2Q9NVK5 253 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.4□□□□□ -1.87
CCDC171-207ENST00000478913 QPCTLQ9NXS2 382 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 TAS2R3Q9NYW6 316 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 AIPL1Q9NZN9 384 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 RABL2BQ9UNT1 228 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 AURKCQ9UQB9 309 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 WDR45Q9Y484 360 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 USH1CQ9Y6N9 552 aa3.4□□□□□ -1.87
CCDC171-207ENST00000478913 PKD1P98161 4303 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 F8VZ95 297 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 H3BMQ9 156 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 RAD51CO43502 376 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 B4GALT2O60909 372 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 PFDN1O60925 122 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 AK1P00568 194 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 IGLV1-47P01700 117 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 RHOCP08134 193 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 ATP6V1C1P21283 382 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 VHLP40337 213 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 KIR2DS2P43631 304 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 PSMD7P51665 324 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 CCNG1P51959 295 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 WNT4P56705 351 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 BPIFB3P59826 476 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 POLR2FP61218 127 aaKnown RBP3.39□□□□□ -1.87
CCDC171-207ENST00000478913 HTD2P86397 168 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 LAGE3Q14657 143 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 TMEM41BQ5BJD5 291 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 RABGAP1LQ5R372 815 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 OTPQ5XKR4 325 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 UGT2A3Q6UWM9 527 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 OOSP2Q86WS3 158 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 ERI1Q8IV48 349 aaKnown RBP3.39□□□□□ -1.87
CCDC171-207ENST00000478913 CENPLQ8N0S6 344 aaPredicted RBP3.39□□□□□ -1.87
CCDC171-207ENST00000478913 LINC01561Q8N1V8 128 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 RIBC1Q8N443 379 aaPredicted RBP3.39□□□□□ -1.87
CCDC171-207ENST00000478913 OR9A1PQ8NGU1 263 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 ERMNQ8TAM6 284 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 DNAJC9Q8WXX5 260 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 NTAN1Q96AB6 310 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 ZNF414Q96IQ9 312 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 ANKRD36BP1Q96IX9 119 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 SERPINB12Q96P63 405 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 GPA33Q99795 319 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 ERP44Q9BS26 406 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 TMEM109Q9BVC6 243 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 SFXN3Q9BWM7 321 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 Q9H521 79 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 FAM60AQ9NP50 221 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 POLE3Q9NRF9 147 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 IMP3Q9NV31 184 aaKnown RBP3.39□□□□□ -1.87
CCDC171-207ENST00000478913 ZNF221Q9UK13 617 aa3.39□□□□□ -1.87
CCDC171-207ENST00000478913 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.39□□□□□ -1.87
CCDC171-207ENST00000478913 OARD1Q9Y530 152 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms